RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TMEM211Q6ICI0 200 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 CRIPAKQ8N1N5 446 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 OR10AD1Q8NGE0 317 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 OR5M8Q8NGP6 311 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 ADIPOR1Q96A54 375 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 RAB40CQ96S21 281 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 C12orf57Q99622 126 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 OR2D2Q9H210 308 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 NTMQ9P121 344 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 TINAGQ9UJW2 476 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 AMDHD2Q9Y303 409 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 ICE1Q9Y2F5 2266 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 CDIPTO14735 213 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 UPK3AO75631 287 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 HRASP01112 189 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 TTRP02766 147 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 CLEC3BP05452 202 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 CPN1P15169 458 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 BPIFB3P59826 476 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 SURF2Q15527 256 aaPredicted RBP12.29□□□□□ -0.44
CDH3-201ENST00000264012 HFEQ30201 348 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 VMA21Q3ZAQ7 101 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 TSPO2Q5TGU0 170 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 FBXW9Q5XUX1 488 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 FBLIM1Q8WUP2 373 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 NTNG2Q96CW9 530 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 BSCL2Q96G97 398 aaPredicted RBP12.29□□□□□ -0.44
CDH3-201ENST00000264012 ZNF251Q9BRH9 671 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 GPR27Q9NS67 375 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 CACNG5Q9UF02 275 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 A0A1W2PQM1 296 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 PDGFBP01127 241 aaPredicted RBP12.29□□□□□ -0.44
CDH3-201ENST00000264012 EFNB2P52799 333 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 RNF212Q495C1 297 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 ANGPTL4Q9BY76 406 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 SLC25A4P12235 298 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 MNX1P50219 401 aaPredicted RBP12.28□□□□□ -0.44
CDH3-201ENST00000264012 PRSS54Q6PEW0 395 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 FAM96BQ9Y3D0 163 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 RPS2P15880 293 aaKnown RBP12.28□□□□□ -0.44
CDH3-201ENST00000264012 RPS4Y1P22090 263 aaKnown RBP12.28□□□□□ -0.44
CDH3-201ENST00000264012 CSN1S1P47710 185 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 MGAT2Q10469 447 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 FAM27BQ5VT28 67 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 OR5D13Q8NGL4 314 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 LOXL4Q96JB6 756 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 PCDHGA9Q9Y5G4 932 aaKnown RBP12.28□□□□□ -0.44
CDH3-201ENST00000264012 HS3ST3B1Q9Y662 390 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 KLF9Q13886 244 aaPredicted RBP12.28□□□□□ -0.44
CDH3-201ENST00000264012 ACY3Q96HD9 319 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 UQCC1Q9NVA1 299 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 EP300Q09472 2414 aaPredicted RBP12.28□□□□□ -0.44
CDH3-201ENST00000264012 LANCL1O43813 399 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 CD1AP06126 327 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 RAB7AP51149 207 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 RPS4XP62701 263 aaKnown RBP12.28□□□□□ -0.44
CDH3-201ENST00000264012 ENDOGQ14249 297 aaKnown RBP12.28□□□□□ -0.44
CDH3-201ENST00000264012 OR5C1Q8NGR4 320 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 NMES1Q9C002 83 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 IFT22Q9H7X7 185 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 TMEM74BQ9NUR3 256 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 STARD10Q9Y365 291 aa12.28□□□□□ -0.44
CDH3-201ENST00000264012 hADV38S2A0JD32 116 aa12.27□□□□□ -0.44
CDH3-201ENST00000264012 CXCL3P19876 107 aa12.27□□□□□ -0.44
CDH3-201ENST00000264012 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.44
CDH3-201ENST00000264012 CLEC18BQ6UXF7 455 aa12.27□□□□□ -0.44
CDH3-201ENST00000264012 ZNF561Q8N587 486 aa12.27□□□□□ -0.44
CDH3-201ENST00000264012 KDF1Q8NAX2 398 aaPredicted RBP12.27□□□□□ -0.44
CDH3-201ENST00000264012 VWCEQ96DN2 955 aa12.27□□□□□ -0.44
CDH3-201ENST00000264012 TVP23CQ96ET8 276 aa12.27□□□□□ -0.44
CDH3-201ENST00000264012 ZNF331Q9NQX6 463 aaPredicted RBP12.27□□□□□ -0.44
CDH3-201ENST00000264012 LINC00862A6NCI5 91 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 TRAF3IP2O43734 574 aaPredicted RBP12.27□□□□□ -0.45
CDH3-201ENST00000264012 AGFG2O95081 481 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 HPXP02790 462 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 BCL3P20749 454 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 KHDC1LQ5JSQ8 128 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 ZNF439Q8NDP4 499 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 ZNF107Q9UII5 783 aaPredicted RBP12.27□□□□□ -0.45
CDH3-201ENST00000264012 FAM24AA6NFZ4 105 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 HMSDA8MTL9 139 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 TRDCB7Z8K6 153 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 J3QT63 122 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 CT45A10P0DMU9 189 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 STPG1Q5TH74 334 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 OR2C3Q8N628 320 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 GMPPAQ96IJ6 420 aaPredicted RBP12.27□□□□□ -0.45
CDH3-201ENST00000264012 LEUTXA8MZ59 168 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 CEBPEQ15744 281 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 HSD17B13Q7Z5P4 300 aaPredicted RBP12.27□□□□□ -0.45
CDH3-201ENST00000264012 GINS3Q9BRX5 216 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 PRDM6Q9NQX0 595 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 OR6C3Q9NZP0 311 aa12.27□□□□□ -0.45
CDH3-201ENST00000264012 IGHV3-13P01766 116 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 IGHV3-7P01780 117 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 IGLV3-21P80748 117 aaPredicted RBP12.26□□□□□ -0.45
CDH3-201ENST00000264012 MIDNQ504T8 468 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 TMEM88Q6PEY1 159 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 AMELYQ99218 206 aa12.26□□□□□ -0.45
CDH3-201ENST00000264012 GAL3ST2Q9H3Q3 398 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms