RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 KISS1Q15726 138 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 BATF2Q8N1L9 274 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 ELMOD3Q96FG2 381 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 BORCS8Q96FH0 119 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 TMPRSS13Q9BYE2 586 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 SLC7A11Q9UPY5 501 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 V9GY05 133 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 CD8AP01732 235 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 IGHV1-46P01743 117 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 ACAA1P09110 424 aaPredicted RBP23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 SSTR2P30874 369 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 OR3A4PP47883 348 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 EFNB3Q15768 340 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 NLRC3Q7RTR2 1065 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 TPRA1Q86W33 373 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 LYPD6Q86Y78 171 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 CALHM1Q8IU99 346 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 PDZD9Q8IXQ8 264 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 HIST1H2AAQ96QV6 131 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 DPAGT1Q9H3H5 408 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 CNTD2Q9H8S5 307 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 FBN2P35556 2912 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 NBPF19A0A087WUL8 3843 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 RAB19A4D1S5 217 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 FAM74A7A6NL05 159 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 LPLP06858 475 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 ZNF93P35789 620 aaPredicted RBP23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 HOXA4Q00056 320 aaPredicted RBP23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 FAM74A3Q4VXF1 159 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 PRAMEF6Q5VXH4 476 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 SFXN4Q6P4A7 337 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 ATRAIDQ6UW56 229 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 TMEM200AQ86VY9 491 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 OR4D6Q8NGJ1 314 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 MRPS24Q96EL2 167 aaKnown RBP23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 GPER1Q99527 375 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 DYNLRB1Q9NP97 96 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 LAMP3Q9UQV4 416 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 ZNF729A6NN14 1252 aaPredicted RBP23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 B9A039 149 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 EIF3GO75821 320 aaKnown RBP eCLIP23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 GRPP07492 148 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 DANCRP0C864 163 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 GPR176Q14439 515 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 ANKRD39Q53RE8 183 aa23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 ZNF57Q68EA5 555 aaPredicted RBP23.31■■□□□ 1.32
SMARCD3-201ENST00000262188 SPRY1O43609 319 aaPredicted RBP23.3■■□□□ 1.32
SMARCD3-201ENST00000262188 POU3F4P49335 361 aa23.3■■□□□ 1.32
SMARCD3-201ENST00000262188 FUT6P51993 359 aa23.3■■□□□ 1.32
SMARCD3-201ENST00000262188 P2RY14Q15391 338 aa23.3■■□□□ 1.32
SMARCD3-201ENST00000262188 IDNKQ5T6J7 187 aa23.3■■□□□ 1.32
SMARCD3-201ENST00000262188 C1QL2Q7Z5L3 287 aa23.3■■□□□ 1.32
SMARCD3-201ENST00000262188 OR5A2Q8NGI9 324 aa23.3■■□□□ 1.32
SMARCD3-201ENST00000262188 SPSB1Q96BD6 273 aa23.3■■□□□ 1.32
SMARCD3-201ENST00000262188 CXorf58Q96LI9 332 aa23.3■■□□□ 1.32
SMARCD3-201ENST00000262188 UFSP2Q9NUQ7 469 aa23.3■■□□□ 1.32
SMARCD3-201ENST00000262188 RLN2P04090 185 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 RBP2P50120 134 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 CCL8P80075 99 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 TLE4Q04727 773 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 MPPED2Q15777 294 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 MICU1Q9BPX6 476 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 PLEKHF2Q9H8W4 249 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 TACC2O95359 2948 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 RAI1Q7Z5J4 1906 aaPredicted RBP23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 CENPEQ02224 2701 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 CHD3Q12873 2000 aaKnown RBP23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 IFITM5A6NNB3 132 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 ANGPTL7O43827 346 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 IL18Q14116 193 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 RNF212Q495C1 297 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 TMEM17Q86X19 198 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 GLYATL2Q8WU03 294 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 NRGNQ92686 78 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 OR2V2Q96R30 315 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 RTL8AQ9BWD3 113 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 TREM2Q9NZC2 230 aa23.29■■□□□ 1.32
SMARCD3-201ENST00000262188 C17orf100A8MU93 164 aa23.28■■□□□ 1.32
SMARCD3-201ENST00000262188 ERCC1P07992 297 aaPredicted RBP23.28■■□□□ 1.32
SMARCD3-201ENST00000262188 PAN3Q58A45 887 aaKnown RBP23.28■■□□□ 1.32
SMARCD3-201ENST00000262188 GLT8D1Q68CQ7 371 aa23.28■■□□□ 1.32
SMARCD3-201ENST00000262188 NKAIN3Q8N8D7 197 aa23.28■■□□□ 1.32
SMARCD3-201ENST00000262188 METTL17Q9H7H0 456 aaPredicted RBP23.28■■□□□ 1.32
SMARCD3-201ENST00000262188 MEGF11A6BM72 1044 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 ALDOBP05062 364 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 GNG3P63215 75 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 ZNF154Q13106 437 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 ZNF826PQ6ZT77 177 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 LHFPL2Q6ZUX7 228 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 ITLN1Q8WWA0 313 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 VRK1Q99986 396 aaPredicted RBP23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 CXXC4Q9H2H0 198 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 LIME1Q9H400 295 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 ZNF787Q6DD87 383 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 C11orf71Q6IPW1 123 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 HAGHLQ6PII5 290 aaPredicted RBP23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 TGIF2LYQ8IUE0 185 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 ZNF611Q8N823 705 aa23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 NARS2Q96I59 477 aaKnown RBP23.27■■□□□ 1.32
SMARCD3-201ENST00000262188 TECTBQ96PL2 329 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms