RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TIGITQ495A1 244 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 CRB2Q5IJ48 1285 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 Q6ZSR9 355 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 SPNS2Q8IVW8 549 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 OR6K2Q8NGY2 324 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 CYB5D2Q8WUJ1 264 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 DCBLD2Q96PD2 775 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 RASL10BQ96S79 203 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 CABLES2Q9BTV7 478 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 GPR174Q9BXC1 333 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 SLC17A9Q9BYT1 436 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 MS4A5Q9H3V2 200 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 TMEM242Q9NWH2 141 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF214Q9UL59 606 aaPredicted RBP6.75□□□□□ -1.33
GPNMB-201ENST00000258733 HELZP42694 1942 aaKnown RBP6.75□□□□□ -1.33
GPNMB-201ENST00000258733 C13orf42A0A1B0GVH6 325 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF850A8MQ14 1090 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 TNFSF12O43508 249 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 NPY1RP25929 384 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 ATP6V0CP27449 155 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 GPR1P46091 355 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 TMEM25Q86YD3 366 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF611Q8N823 705 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 OR5AK2Q8NH90 309 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 FAM131CQ96AQ9 280 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 TVP23CQ96ET8 276 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 SIRPDQ9H106 197 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 SMDT1Q9H4I9 107 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 MOB1AQ9H8S9 216 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 MARCH4Q9P2E8 410 aaPredicted RBP6.75□□□□□ -1.33
GPNMB-201ENST00000258733 FBXL17Q9UF56 701 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 AK3Q9UIJ7 227 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 PLAGL1Q9UM63 463 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 DNAJC15Q9Y5T4 150 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 CEP350Q5VT06 3117 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 TMEM189A5PLL7 270 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 OR51F1A6NGY5 319 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 FOXI3A8MTJ6 420 aaPredicted RBP6.75□□□□□ -1.33
GPNMB-201ENST00000258733 GRXCR1A8MXD5 290 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 UPK3BL1B0FP48 263 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 UPK3BL2E5RIL1 263 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 GAPDHSO14556 408 aaPredicted RBP6.75□□□□□ -1.33
GPNMB-201ENST00000258733 TTRP02766 147 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 TYMSP04818 313 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 ACP5P13686 325 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 PGCP20142 388 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 GPM6AP51674 278 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 HMGCS2P54868 508 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 SFXN4Q6P4A7 337 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF621Q6ZSS3 439 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 TMEM37Q8WXS4 190 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 A0A0G2JLM5 398 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 KIR2DS5A0A0G2JLQ3 304 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 A0A0G2JNG1 304 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 GAGE12JA6NER3 117 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 SLC22A20A6NK97 555 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 OR4C45A6NMZ5 311 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 SLC31A1O15431 190 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 GAGE7O76087 117 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 GAGE12FP0CL80 117 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 GAGE12GP0CL81 117 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 GAGE12IP0CL82 117 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 HRH1P35367 487 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 KIR2DS4P43632 304 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 PTH2RP49190 550 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 CSRP3P50461 194 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 SIRPAP78324 504 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 SRSF2Q01130 221 aaKnown RBP6.74□□□□□ -1.33
GPNMB-201ENST00000258733 MZT1Q08AG7 82 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 FOXF1Q12946 379 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 GAGE4Q13068 117 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 KIR2DS5Q14953 304 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 TMEM78Q5T7P6 136 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 BHLHA9Q7RTU4 235 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 TWIST2Q8WVJ9 160 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 SLC25A38Q96DW6 304 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 GRAMD2BQ96HH9 432 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 DOHHQ9BU89 302 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 TSSK6Q9BXA6 273 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF443Q9Y2A4 671 aaPredicted RBP6.74□□□□□ -1.33
GPNMB-201ENST00000258733 MRPS28Q9Y2Q9 187 aaKnown RBP6.74□□□□□ -1.33
GPNMB-201ENST00000258733 NEUROG3Q9Y4Z2 214 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 NUP210LQ5VU65 1888 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 LIPT2A6NK58 231 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 H0YL77 283 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 K7EN84 100 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 AGFG2O95081 481 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 ETHE1O95571 254 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 PMS2P2O95744 297 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 CTSEP14091 401 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 SLC6A12P48065 614 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 CNN1P51911 297 aaKnown RBP6.74□□□□□ -1.33
GPNMB-201ENST00000258733 RHOBP62745 196 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 INSL4Q14641 139 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 FAM162BQ5T6X4 162 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 SPRYD7Q5W111 196 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 LEG1Q6P5S2 330 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 FOXI2Q6ZQN5 318 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 OR4F17Q8NGA8 305 aa6.74□□□□□ -1.33
GPNMB-201ENST00000258733 OR8B12Q8NGG6 310 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms