RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 HINT2Q9BX68 163 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 GPR87Q9BY21 358 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 NARFLQ9H6Q4 476 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 TREM1Q9NP99 234 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 MTCH1Q9NZJ7 389 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 NSG2Q9Y328 171 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 EXPH5Q8NEV8 1989 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 OR14I1A6ND48 311 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 CYTIPO60759 359 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 PRAF2O60831 178 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 CSRP1P21291 193 aaKnown RBP7.82□□□□□ -1.16
CKAP2-201ENST00000258607 NUP62P37198 522 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-201ENST00000258607 GLP1RP43220 463 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 FHITP49789 147 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 PLA2G2CQ5R387 149 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 PXDC1Q5TGL8 231 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 TMEM268Q5VZI3 342 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 LRP11Q86VZ4 500 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 SGPP2Q8IWX5 399 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 SLC17A5Q9NRA2 495 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 CTDSPLO15194 276 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 LRP3O75074 770 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF708P17019 499 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 FSTP19883 344 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 AESQ08117 197 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 RPUSD3Q6P087 351 aaKnown RBP7.81□□□□□ -1.16
CKAP2-201ENST00000258607 ASCL5Q7RTU5 278 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 FAM109AQ8N4B1 249 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 LINC00052Q96N35 136 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 CCL28Q9NRJ3 127 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 ERRFI1Q9UJM3 462 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-201ENST00000258607 IGLV3-32A0A0A0MS00 114 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 C21orf140B9A014 251 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 WRBO00258 174 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 OPN1MWP04001 364 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 OPN1MW2P0DN77 364 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 OPN1MW3P0DN78 364 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 PRB4P10163 310 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-201ENST00000258607 IAPPP10997 89 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 AGTR1P30556 359 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 THBS4P35443 961 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 OR5AP2Q8NGF4 316 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 C15orf40Q8WUR7 153 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 HPSE2Q8WWQ2 592 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 PP6455Q8WZ26 134 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 THRSPQ92748 146 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 RRNAD1Q96FB5 475 aaKnown RBP7.81□□□□□ -1.16
CKAP2-201ENST00000258607 BSCL2Q96G97 398 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-201ENST00000258607 ADGRG7Q96K78 797 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 SLC25A21Q9BQT8 299 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-201ENST00000258607 UQCC2Q9BRT2 126 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 DDA1Q9BW61 102 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 NPDC1Q9NQX5 325 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-201ENST00000258607 OR1A1Q9P1Q5 309 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 MTORP42345 2549 aa7.81□□□□□ -1.16
CKAP2-201ENST00000258607 TRAV14DV4A0A0A6YYC5 116 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 LEUTXA8MZ59 168 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 CHRM2P08172 466 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 MELTFP08582 738 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 GIPP09681 153 aaPredicted RBP7.8□□□□□ -1.16
CKAP2-201ENST00000258607 DLX1P56177 255 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 PPA1Q15181 289 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 HIST3H3Q16695 136 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 C1QTNF12Q5T7M4 302 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 C20orf204Q6ZNR8 217 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 STPG2Q8N412 459 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 RPS4Y2Q8TD47 263 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 MRGPRDQ8TDS7 321 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 ZPBPQ9BS86 351 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 MRI1Q9BV20 369 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 GSX2Q9BZM3 304 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 MOB1AQ9H8S9 216 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 ANXA10Q9UJ72 324 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 MFNGO00587 321 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 NME2P1O60361 137 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 IGHV1-2P23083 117 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 FBXW9Q5XUX1 488 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 FIP1L1Q6UN15 594 aaKnown RBP7.8□□□□□ -1.16
CKAP2-201ENST00000258607 OR1S1Q8NH92 325 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 TMEM230Q96A57 120 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 SCNM1Q9BWG6 230 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 FGF23Q9GZV9 251 aaPredicted RBP7.8□□□□□ -1.16
CKAP2-201ENST00000258607 hCG_38984A0A1B0GV85 526 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 DEGS1O15121 323 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 GALR2O43603 387 aaPredicted RBP7.8□□□□□ -1.16
CKAP2-201ENST00000258607 SSSCA1O60232 199 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 APOC1P02654 83 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 FCGR3AP08637 254 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 CST2P09228 141 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 SNRPCP09234 159 aaKnown RBP7.8□□□□□ -1.16
CKAP2-201ENST00000258607 TRAPPC2P0DI81 140 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 TRAPPC2BP0DI82 140 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 NFYBP25208 207 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 POLR2GP62487 172 aaKnown RBP eCLIP7.8□□□□□ -1.16
CKAP2-201ENST00000258607 CCL8P80075 99 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 QRFPP83859 136 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF816Q0VGE8 651 aaPredicted RBP7.8□□□□□ -1.16
CKAP2-201ENST00000258607 OR8G1Q15617 311 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 C10orf128Q5T292 105 aa7.8□□□□□ -1.16
CKAP2-201ENST00000258607 RPL7L1Q6DKI1 246 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms