RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 RPS16P62249 146 aaKnown RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 SURF2Q15527 256 aaPredicted RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 TESK1Q15569 626 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 USF2Q15853 346 aaPredicted RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 PHYHD1Q5SRE7 291 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 SPATA46Q5T0L3 261 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 ABHD17BQ5VST6 288 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 OR8G2PQ6IF36 304 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 LIAT1Q6ZQX7 453 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 OR6S1Q8NH40 331 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 SPSB2Q99619 263 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 SLC35B3Q9H1N7 401 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 PLK3Q9H4B4 646 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 C12orf49Q9H741 205 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 BARX1Q9HBU1 254 aaPredicted RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 CYTL1Q9NRR1 136 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 LIPGQ9Y5X9 500 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 PCNX3Q9H6A9 2034 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 KIF26AQ9ULI4 1882 aaPredicted RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 C3orf85A0A1B0GTC6 90 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 ANKRD30BLA7E2S9 258 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 ZNF727A8MUV8 499 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 E9PLN8 166 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 HMGB3O15347 200 aaKnown RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 SRSF10O75494 262 aaKnown RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 PPYP01298 95 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 PRF1P14222 555 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 FOSL2P15408 326 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 FKBP2P26885 142 aaKnown RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 QRFPP83859 136 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 RAB35Q15286 201 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 EXT1Q16394 746 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 HIST2H3PS2Q5TEC6 136 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 ZNF574Q6ZN55 896 aaPredicted RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 SKA3Q8IX90 412 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 SPEM1Q8N4L4 309 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 ZNF441Q8N8Z8 693 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 OR10AD1Q8NGE0 317 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 OR10D3Q8NH80 312 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 BSCL2Q96G97 398 aaPredicted RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 LYZL4Q96KX0 146 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 PARP11Q9NR21 331 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 TRAPPC2LQ9UL33 140 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 PPP1R3CQ9UQK1 317 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 PI4KAP42356 2102 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 DIDO1Q9BTC0 2240 aaKnown RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 ZNF816-ZNF321PA0A0X1KG74 233 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 A0A1W2PR80 420 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 CEBPZOSA8MTT3 80 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 ZNF732B4DXR9 585 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 F8VVB4 439 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 F8VWA3 439 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 FGF16O43320 207 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 TUSC2O75896 110 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 ANOS1P23352 680 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 CYB561P49447 251 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 FUT6P51993 359 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 RAC1P63000 192 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 EWSR1Q01844 656 aaKnown RBP eCLIP4.13□□□□□ -1.75
USP44-201ENST00000258499 ZNF92Q03936 586 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 LTC4SQ16873 150 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 SPANXN5Q5MJ07 72 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 DHRS7BQ6IAN0 325 aaPredicted RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 IL22RA1Q8N6P7 574 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 ADPRHL1Q8NDY3 354 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 LFNGQ8NES3 379 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 SNIP1Q8TAD8 396 aaKnown RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 RBMXL1Q96E39 390 aaKnown RBP4.13□□□□□ -1.75
USP44-201ENST00000258499 POM121Q96HA1 1249 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 RARRES2Q99969 163 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 TCEAL7Q9BRU2 100 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 SLC7A10Q9NS82 523 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 KIAA1549LQ6ZVL6 1849 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 SMCO3A2RU48 225 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 OR6C6A6NF89 314 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 CRYM-AS1A6NIL9 109 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 MPPED1O15442 326 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 CYB5BO43169 146 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 CLDN1O95832 211 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 S100A8P05109 93 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 RAB5AP20339 215 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 ATP6V0CP27449 155 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 EPHA8P29322 1005 aaPredicted RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 NPBWR2P48146 333 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 IDH3GP51553 393 aaPredicted RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 SRPXP78539 464 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 TLE4Q04727 773 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 TMEM267Q0VDI3 215 aaPredicted RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 ZNF154Q13106 437 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 ENDOGQ14249 297 aaKnown RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 ZNF239Q16600 458 aaKnown RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 IZUMO4Q1ZYL8 232 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 TRIM61Q5EBN2 209 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 CXorf66Q5JRM2 361 aaPredicted RBP4.12□□□□□ -1.75
USP44-201ENST00000258499 TBC1D26Q86UD7 250 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 CARFQ8N187 725 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 GAPTQ8N292 157 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 C15orf54Q8N8G6 183 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 NECAP1Q8NC96 275 aa4.12□□□□□ -1.75
USP44-201ENST00000258499 NFAM1Q8NET5 270 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms