RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 VHLLQ6RSH7 139 aa16.08■□□□□ 0.17
TRIM47-201ENST00000254816 TMEM200AQ86VY9 491 aa16.08■□□□□ 0.17
TRIM47-201ENST00000254816 EMG1Q92979 244 aaKnown RBP16.08■□□□□ 0.17
TRIM47-201ENST00000254816 MSL2Q9HCI7 577 aa16.08■□□□□ 0.17
TRIM47-201ENST00000254816 PCDHB16Q9NRJ7 776 aa16.08■□□□□ 0.17
TRIM47-201ENST00000254816 TMEM100Q9NV29 134 aa16.08■□□□□ 0.17
TRIM47-201ENST00000254816 ZNF107Q9UII5 783 aaPredicted RBP16.08■□□□□ 0.17
TRIM47-201ENST00000254816 AK3Q9UIJ7 227 aa16.08■□□□□ 0.17
TRIM47-201ENST00000254816 AUP1Q9Y679 476 aa16.08■□□□□ 0.17
TRIM47-201ENST00000254816 CHD3Q12873 2000 aaKnown RBP16.08■□□□□ 0.17
TRIM47-201ENST00000254816 SERPINE3A8MV23 424 aa16.08■□□□□ 0.16
TRIM47-201ENST00000254816 ATP6V1G2-DDX39BF2Z307 99 aa16.08■□□□□ 0.16
TRIM47-201ENST00000254816 ATXN7O15265 892 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-201ENST00000254816 OR7C1O76099 320 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-201ENST00000254816 DUSP1P28562 367 aa16.08■□□□□ 0.16
TRIM47-201ENST00000254816 PLA2G5P39877 138 aa16.08■□□□□ 0.16
TRIM47-201ENST00000254816 MEF2DQ14814 521 aa16.08■□□□□ 0.16
TRIM47-201ENST00000254816 RGS7BPQ6MZT1 257 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-201ENST00000254816 Q6ZR03 302 aa16.08■□□□□ 0.16
TRIM47-201ENST00000254816 TMUB2Q71RG4 321 aa16.08■□□□□ 0.16
TRIM47-201ENST00000254816 Q8NFD4 153 aa16.08■□□□□ 0.16
TRIM47-201ENST00000254816 OCSTAMPQ9BR26 566 aa16.08■□□□□ 0.16
TRIM47-201ENST00000254816 ZNF701Q9NV72 531 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-201ENST00000254816 HLA-AP01891 365 aaKnown RBP16.07■□□□□ 0.16
TRIM47-201ENST00000254816 GRPP07492 148 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 S100A11P31949 105 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 CA7P43166 264 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 CASP6P55212 293 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 FGF12P61328 243 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 IKZF1Q13422 519 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 MBNL2Q5VZF2 373 aaKnown RBP16.07■□□□□ 0.16
TRIM47-201ENST00000254816 TMEM211Q6ICI0 200 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 WFDC8Q8IUA0 241 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 SCCPDHQ8NBX0 429 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 OR4K15Q8NH41 348 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 ARL6Q9H0F7 186 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 DUSP13Q9UII6 198 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 ANAPC10Q9UM13 185 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 TMA7Q9Y2S6 64 aaKnown RBP16.07■□□□□ 0.16
TRIM47-201ENST00000254816 COL6A6A6NMZ7 2263 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 FAM221AA4D161 298 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 CCSO14618 274 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 PPP3CBP16298 524 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 PRKACAP17612 351 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 C4BPBP20851 252 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 KITLGP21583 273 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 RAB14P61106 215 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 MPPED2Q15777 294 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 MICBQ29980 383 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 ELP2Q6IA86 826 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 LIN54Q6MZP7 749 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 PRRT1Q99946 306 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 HSF4Q9ULV5 492 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 POLEQ07864 2286 aa16.07■□□□□ 0.16
TRIM47-201ENST00000254816 NAT1P18440 290 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 AP2S1P53680 142 aaPredicted RBP16.06■□□□□ 0.16
TRIM47-201ENST00000254816 GMFBP60983 142 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 IL24Q13007 206 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 ZNF154Q13106 437 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 C3orf36Q3SXR2 165 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 PCSK4Q6UW60 755 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 GTF3AQ92664 365 aaKnown RBP16.06■□□□□ 0.16
TRIM47-201ENST00000254816 GSX2Q9BZM3 304 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 PKIBQ9C010 78 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 NOP16Q9Y3C1 178 aaKnown RBP16.06■□□□□ 0.16
TRIM47-201ENST00000254816 IGKV1D-8A0A087WSZ0 117 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 LRP5LA4QPB2 252 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 OR2AT4A6NND4 320 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 HMSDA8MTL9 139 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 CCL21O00585 134 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 CDIPTO14735 213 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 TUBG1P23258 451 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 MPZP25189 248 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 CD34P28906 385 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 RBMXP38159 391 aaKnown RBP16.06■□□□□ 0.16
TRIM47-201ENST00000254816 ARL6IP1Q15041 203 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 FAM76BQ5HYJ3 339 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 ALKAL2Q6UX46 152 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 TUBG2Q9NRH3 451 aa16.06■□□□□ 0.16
TRIM47-201ENST00000254816 TRAV14DV4A0A0A6YYC5 116 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 J3QT63 122 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 PDCD6O75340 191 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 THBDP07204 575 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 AMY2BP19961 511 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 CD40P25942 277 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 CBX5P45973 191 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 PPP1R1AQ13522 171 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 SNTB1Q13884 538 aaKnown RBP16.05■□□□□ 0.16
TRIM47-201ENST00000254816 HOGA1Q86XE5 327 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 CMSS1Q9BQ75 279 aaKnown RBP16.05■□□□□ 0.16
TRIM47-201ENST00000254816 SLC2A8Q9NY64 477 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 PLEKHA6Q9Y2H5 1048 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 I3L521 148 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 RP2O75695 350 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 NKX6-1P78426 367 aaPredicted RBP16.05■□□□□ 0.16
TRIM47-201ENST00000254816 NHLRC3Q5JS37 347 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 ADAD2Q8NCV1 583 aaKnown RBP16.05■□□□□ 0.16
TRIM47-201ENST00000254816 SYT3Q9BQG1 590 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 ZNF442Q9H7R0 627 aa16.05■□□□□ 0.16
TRIM47-201ENST00000254816 FN3KRPQ9HA64 309 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms