RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 IL13RA2Q14627 380 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 PDCD1Q15116 288 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 FBXW12Q6X9E4 464 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 TMEM45BQ96B21 275 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 SAV1Q9H4B6 383 aaPredicted RBP14.18□□□□□ -0.14
HOXD3-201ENST00000249440 TMED3Q9Y3Q3 217 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 DOCK10Q96BY6 2186 aa14.17□□□□□ -0.14
HOXD3-201ENST00000249440 ST8SIA3O43173 380 aa14.17□□□□□ -0.14
HOXD3-201ENST00000249440 PHF1O43189 567 aaPredicted RBP14.17□□□□□ -0.14
HOXD3-201ENST00000249440 MRPL33O75394 65 aaKnown RBP14.17□□□□□ -0.14
HOXD3-201ENST00000249440 SERPINA7P05543 415 aa14.17□□□□□ -0.14
HOXD3-201ENST00000249440 GLI4P10075 376 aa14.17□□□□□ -0.14
HOXD3-201ENST00000249440 P2RY1P47900 373 aa14.17□□□□□ -0.14
HOXD3-201ENST00000249440 SLC25A26Q70HW3 274 aa14.17□□□□□ -0.14
HOXD3-201ENST00000249440 CPEB3Q8NE35 698 aaKnown RBP14.17□□□□□ -0.14
HOXD3-201ENST00000249440 KIRREL1Q96J84 757 aa14.17□□□□□ -0.14
HOXD3-201ENST00000249440 ATPIF1Q9UII2 106 aa14.17□□□□□ -0.14
HOXD3-201ENST00000249440 NOSIPQ9Y314 301 aaKnown RBP14.17□□□□□ -0.14
HOXD3-201ENST00000249440 ZNF175Q9Y473 711 aa14.17□□□□□ -0.14
HOXD3-201ENST00000249440 ZNF587BE7ETH6 402 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 C6orf15Q6UXA7 325 aaPredicted RBP14.16□□□□□ -0.14
HOXD3-201ENST00000249440 OR52M1Q8NGK5 317 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 OR11L1Q8NGX0 322 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 PLSCR2Q9NRY7 297 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A10PA6NDY2 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A18PA6NE21 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A16PA6NEW6 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A20PA6NIJ5 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A8PA6NJQ4 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A7PA6NKC0 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A22PA8MWA6 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A12PA8MX19 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A5PA8MXJ8 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A23PA8MXZ1 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 LINC01387J3KSC0 135 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 TSPAN15O95858 294 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 PPYP01298 95 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 IGHV3-9P01782 118 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 OR8U9P0C7N5 309 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A15PP0C7V4 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A13PP0C7W8 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A14PP0C7W9 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM90A24PP0C7X0 464 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 AADACP22760 399 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 RFC3P40938 356 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 ID4P47928 161 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 CLEC9AQ6UXN8 241 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 COLCA1Q6ZS62 124 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 OR8U1Q8NH10 309 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 FAM86C1Q9NVL1 165 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 P4HTMQ9NXG6 502 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 BOKQ9UMX3 212 aaPredicted RBP14.16□□□□□ -0.14
HOXD3-201ENST00000249440 R4GN57 208 aa14.16□□□□□ -0.14
HOXD3-201ENST00000249440 PINLYPA6NC86 204 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 DANCRP0C864 163 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 SP9P0CG40 484 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 NFYBP25208 207 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 NPBWR2P48146 333 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 FAM185AQ8N0U4 392 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 COMMD1Q8N668 190 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 Q8NFD4 153 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 GINS3Q9BRX5 216 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 C3orf85A0A1B0GTC6 90 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 FAM157AC9JC47 383 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 RPL36A-HNRNPH2H7BZ11 118 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 SRPXP78539 464 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 FOXO1Q12778 655 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 GNMTQ14749 295 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 HMGN3Q15651 99 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 TCEAL6Q6IPX3 200 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 SLC23A3Q6PIS1 610 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 Q6ZPA2 131 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 LINC00518Q8N0U6 118 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 CT55Q8WUE5 264 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 TCEAL3Q969E4 200 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 LUZP4Q9P127 313 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 LRFN1Q9P244 771 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 FREM2Q5SZK8 3169 aa14.15□□□□□ -0.14
HOXD3-201ENST00000249440 IGKV3D-15A0A087WSY6 115 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 MPPED1O15442 326 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 F10P00742 488 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 GLAP06280 429 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 SPP1P10451 314 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 RAB13P51153 203 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 PEA15Q15121 130 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 SPINK14Q6IE38 97 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 Q6ZS49 121 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 SLC35G3Q8N808 338 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 BSCL2Q96G97 398 aaPredicted RBP14.14□□□□□ -0.15
HOXD3-201ENST00000249440 TP53RKQ96S44 253 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 PAPOLGQ9BWT3 736 aaKnown RBP14.14□□□□□ -0.15
HOXD3-201ENST00000249440 LINC00470Q9BZP3 86 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 PARP12Q9H0J9 701 aaKnown RBP14.14□□□□□ -0.15
HOXD3-201ENST00000249440 LOXL2Q9Y4K0 774 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 KLF2Q9Y5W3 355 aaPredicted RBP14.14□□□□□ -0.15
HOXD3-201ENST00000249440 KPTNQ9Y664 436 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 FREM1Q5H8C1 2179 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 C9JQL5 133 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 CCNOP22674 350 aa14.14□□□□□ -0.15
HOXD3-201ENST00000249440 ACP1P24666 158 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms