RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 BSCL2Q96G97 398 aaPredicted RBP12.43□□□□□ -0.42
HIF3A-202ENST00000244303 ZPBPQ9BS86 351 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 PARP11Q9NR21 331 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 ZNF816-ZNF321PA0A0X1KG74 233 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 PDCD6O75340 191 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 SFTA3P0C7M3 94 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 RBM11P57052 281 aaKnown RBP12.42□□□□□ -0.42
HIF3A-202ENST00000244303 FAM76BQ5HYJ3 339 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 ACER2Q5QJU3 275 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 LIAT1Q6ZQX7 453 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 SUCNR1Q9BXA5 334 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 PLEKHA2Q9HB19 425 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 LNP1A1A4G5 178 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 E5RGE8 158 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 XRCC2O43543 280 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 MMP7P09237 267 aaPredicted RBP12.42□□□□□ -0.42
HIF3A-202ENST00000244303 F2RL1P55085 397 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 RAB5BP61020 215 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 MALLQ13021 153 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 ZNF611Q8N823 705 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 LRTM2Q8N967 370 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 C18orf12Q96KH6 178 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 SPRY4Q9C004 299 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 PARP12Q9H0J9 701 aaKnown RBP12.42□□□□□ -0.42
HIF3A-202ENST00000244303 NSG2Q9Y328 171 aa12.42□□□□□ -0.42
HIF3A-202ENST00000244303 MEX3AA1L020 520 aaKnown RBP12.41□□□□□ -0.42
HIF3A-202ENST00000244303 CYTIPO60759 359 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 CD5P06127 495 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 HEXAP06865 529 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 CD80P33681 288 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 NPBWR2P48146 333 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 UBAC2Q8NBM4 344 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 CPEB3Q8NE35 698 aaKnown RBP12.41□□□□□ -0.42
HIF3A-202ENST00000244303 OR52M1Q8NGK5 317 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 MOB3AQ96BX8 217 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 MSI2Q96DH6 328 aaKnown RBP12.41□□□□□ -0.42
HIF3A-202ENST00000244303 ZNF442Q9H7R0 627 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 RYDENQ9NUL5 291 aaKnown RBP12.41□□□□□ -0.42
HIF3A-202ENST00000244303 P4HTMQ9NXG6 502 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 STARD10Q9Y365 291 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 CELSR3Q9NYQ7 3312 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 C9JQL5 133 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 H7C1Q1 480 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 EIF3GO75821 320 aaKnown RBP eCLIP12.41□□□□□ -0.42
HIF3A-202ENST00000244303 OR7C1O76099 320 aaPredicted RBP12.41□□□□□ -0.42
HIF3A-202ENST00000244303 SERPINA7P05543 415 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 OR8U9P0C7N5 309 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 JMJD7P0C870 316 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 CYB561P49447 251 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 GFRA1P56159 465 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 SNRPEP62304 92 aaKnown RBP12.41□□□□□ -0.42
HIF3A-202ENST00000244303 DAZAP2Q15038 168 aaPredicted RBP12.41□□□□□ -0.42
HIF3A-202ENST00000244303 SLC25A26Q70HW3 274 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 OR8U1Q8NH10 309 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 CPNE4Q96A23 557 aaPredicted RBP12.41□□□□□ -0.42
HIF3A-202ENST00000244303 DDA1Q9BW61 102 aa12.41□□□□□ -0.42
HIF3A-202ENST00000244303 C9orf172C9J069 976 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 PHF1O43189 567 aaPredicted RBP12.4□□□□□ -0.42
HIF3A-202ENST00000244303 ZNHIT1O43257 154 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 GLAP06280 429 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 S100A9P06702 114 aaKnown RBP12.4□□□□□ -0.42
HIF3A-202ENST00000244303 AADACP22760 399 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 GLP1RP43220 463 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 NOVA1P51513 510 aaKnown RBP12.4□□□□□ -0.42
HIF3A-202ENST00000244303 DMBX1Q8NFW5 382 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 NANPQ8TBE9 248 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 SPSB4Q96A44 273 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 SYT3Q9BQG1 590 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 C1QTNF5Q9BXJ0 243 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 PARPBPQ9NWS1 579 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 ZDHHC8Q9ULC8 765 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 S100A6P06703 90 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 ZNF806P0C7X5 589 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 FUT3P21217 361 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 DUSP1P28562 367 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 UCP3P55916 312 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 HERV-K104P61576 105 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 IGSF11Q5DX21 431 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 TMEM211Q6ICI0 200 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 FBXW12Q6X9E4 464 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 LGI3Q8N145 548 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 PSMF1Q92530 271 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 TECTBQ96PL2 329 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 RSRP1Q9BUV0 290 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 WFDC1Q9HC57 220 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 SMCO4Q9NRQ5 59 aa12.4□□□□□ -0.42
HIF3A-202ENST00000244303 FAM157AC9JC47 383 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 LINC01387J3KSC0 135 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 CD59P13987 128 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 DVL1P1P54792 670 aaPredicted RBP12.39□□□□□ -0.43
HIF3A-202ENST00000244303 FOXO1Q12778 655 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 C9orf135Q5VTT2 229 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 CDCP2Q5VXM1 449 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 SPINK14Q6IE38 97 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 LYPD6BQ8NI32 183 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 C14orf79Q96F83 325 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 KIRREL1Q96J84 757 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 TP53RKQ96S44 253 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 PRDM14Q9GZV8 571 aa12.39□□□□□ -0.43
HIF3A-202ENST00000244303 ARV1Q9H2C2 271 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms