RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 LOC101059948A0A1B0GTJ6 334 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 MMP16P51512 607 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 KISS1Q15726 138 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 ACER2Q5QJU3 275 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 APH1AQ96BI3 265 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 MT-ATP6P00846 226 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 HSPB1P04792 205 aaKnown RBP6.67□□□□□ -1.34
RIF1-201ENST00000243326 MRGPRDQ8TDS7 321 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 FKBP11Q9NYL4 201 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 DTX4Q9Y2E6 619 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 RGS13O14921 159 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 TRGC2P03986 189 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 DRD1P21728 446 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 ZBTB25P24278 435 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 STUMQ69YW2 141 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 H7C2G1 150 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 HIST1H1DP16402 221 aaKnown RBP6.67□□□□□ -1.34
RIF1-201ENST00000243326 LHFPL2Q6ZUX7 228 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 PPP1R35Q8TAP8 253 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 PBX4Q9BYU1 374 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 BOKQ9UMX3 212 aaPredicted RBP6.67□□□□□ -1.34
RIF1-201ENST00000243326 ABCA3Q99758 1704 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 NANOS3P60323 173 aaKnown RBP6.67□□□□□ -1.34
RIF1-201ENST00000243326 DCAF7P61962 342 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 IQCJQ1A5X6 159 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 MICBQ29980 383 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 KIAA1644Q3SXP7 199 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 BCL2L10Q9HD36 194 aa6.67□□□□□ -1.34
RIF1-201ENST00000243326 OR10AD1Q8NGE0 317 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 SPPL3Q8TCT6 385 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 LSM2Q9Y333 95 aaKnown RBP6.66□□□□□ -1.34
RIF1-201ENST00000243326 SLC35E4Q6ICL7 350 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 OR4A47Q6IF82 309 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 SYS1Q8N2H4 156 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 IL20Q9NYY1 176 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 TIMM10BQ9Y5J6 103 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 SCGB2A1O75556 95 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 APOBEC1P41238 236 aaKnown RBP6.66□□□□□ -1.34
RIF1-201ENST00000243326 ZNF83P51522 516 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 CD81P60033 236 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 CD226Q15762 336 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 TMEM255AQ5JRV8 349 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 SSX8Q7RTT4 187 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 CYB561D1Q8N8Q1 229 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 TMEM52Q8NDY8 209 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 OR10G4Q8NGN3 311 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 OR10G9Q8NGN4 311 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 OR10G7Q8NGN6 311 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 CCL28Q9NRJ3 127 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 MIA3Q5JRA6 1907 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 PPOXP50336 477 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 DGAT2L6Q6ZPD8 337 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 LINC00518Q8N0U6 118 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 TMEM174Q8WUU8 243 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 SMOC1Q9H4F8 434 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 NHSQ6T4R5 1651 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 UQCC3Q6UW78 93 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 CMTM3Q96MX0 182 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 WDR13Q9H1Z4 485 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 F11RQ9Y624 299 aaKnown RBP6.66□□□□□ -1.34
RIF1-201ENST00000243326 NUDT19A8MXV4 375 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 WNT5AP41221 380 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 OXGR1Q96P68 337 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 LIN7CQ9NUP9 197 aaKnown RBP6.66□□□□□ -1.34
RIF1-201ENST00000243326 RCC2Q9P258 522 aaKnown RBP6.66□□□□□ -1.34
RIF1-201ENST00000243326 COX7A1P24310 79 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 SURF2Q15527 256 aaPredicted RBP6.66□□□□□ -1.34
RIF1-201ENST00000243326 AMELYQ99218 206 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 H3BQ15 152 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 PGA4P0DJD7 388 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 PGA5P0DJD9 388 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 MESTQ5EB52 335 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 NKX6-3A6NJ46 265 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 C3orf80F5H4A9 247 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 PLPP2O43688 288 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 CD46P15529 392 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 COX5AP20674 150 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 GABRA6Q16445 453 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 OR2Z1Q8NG97 314 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 TMEM9BQ9NQ34 198 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 PRSS50Q9UI38 385 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 AMTP48728 403 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 GNB2P62879 340 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 TLCD2A6NGC4 264 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 LINC00587B1AMM8 73 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 LAIR2Q6ISS4 152 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 ARAP2Q8WZ64 1704 aa6.66□□□□□ -1.34
RIF1-201ENST00000243326 TAAR6Q96RI8 345 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 OR2D2Q9H210 308 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 TIMM9Q9Y5J7 89 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 H3BTX0 84 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 KIR3DL2P43630 455 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 GAPTQ8N292 157 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 ZDHHC22Q8N966 263 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 ZNFX1Q9P2E3 1918 aaKnown RBP6.65□□□□□ -1.34
RIF1-201ENST00000243326 TUBAL3A6NHL2 446 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 SHBQ15464 509 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 C2orf68Q2NKX9 166 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 LTBP3Q9NS15 1303 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 A0A0B4J2E0 115 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms