RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 EEF1E1-BLOC1S5C9J1V9 151 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 RHBDL1O75783 438 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 PRKACAP17612 351 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 DUSP1P28562 367 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 PSG7Q13046 419 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 LRRC37A5PQ49AS3 106 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 FAM76BQ5HYJ3 339 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 WDR86Q86TI4 376 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 ZNF546Q86UE3 836 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 DHRS9Q9BPW9 319 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 WDR13Q9H1Z4 485 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 PLK3Q9H4B4 646 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 COMMD9Q9P000 198 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 LUZP4Q9P127 313 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 FAM215AQ9Y5M1 114 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 SVILO95425 2214 aa15.77■□□□□ 0.12
HOXC11-201ENST00000243082 INTS1Q8N201 2190 aaKnown RBP15.77■□□□□ 0.11
HOXC11-201ENST00000243082 C3orf80F5H4A9 247 aa15.77■□□□□ 0.11
HOXC11-201ENST00000243082 NAPSAO96009 420 aa15.77■□□□□ 0.11
HOXC11-201ENST00000243082 GSG1LQ6UXU4 331 aa15.77■□□□□ 0.11
HOXC11-201ENST00000243082 COQ8AQ8NI60 647 aa15.77■□□□□ 0.11
HOXC11-201ENST00000243082 RTL8AQ9BWD3 113 aa15.77■□□□□ 0.11
HOXC11-201ENST00000243082 RAB18Q9NP72 206 aa15.77■□□□□ 0.11
HOXC11-201ENST00000243082 UBQLN2Q9UHD9 624 aa15.77■□□□□ 0.11
HOXC11-201ENST00000243082 C13orf42A0A1B0GVH6 325 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 C5orf51A6NDU8 294 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 IQCF6A8MYZ5 107 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 J3QT63 122 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 ADAP1O75689 374 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 P2RY6Q15077 328 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 C3P1Q6ZMU1 363 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 Q6ZS49 121 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 FAM58AQ8N1B3 248 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 C17orf78Q8N4C9 275 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 MICU1Q9BPX6 476 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 RDH8Q9NYR8 311 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 MAB21L2Q9Y586 359 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 ESPL1Q14674 2120 aa15.76■□□□□ 0.11
HOXC11-201ENST00000243082 ANKRD34BA5PLL1 514 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 CRYABP02511 175 aaKnown RBP15.75■□□□□ 0.11
HOXC11-201ENST00000243082 FCGR2CP31995 323 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 MPV17P39210 176 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 FOXC1Q12948 553 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 LINC00596Q86U02 117 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 RPRMLQ8N4K4 120 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 KLF14Q8TD94 323 aaPredicted RBP15.75■□□□□ 0.11
HOXC11-201ENST00000243082 NMES1Q9C002 83 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 CHMP1AQ9HD42 196 aaPredicted RBP15.75■□□□□ 0.11
HOXC11-201ENST00000243082 TNFSF18Q9UNG2 199 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 DCHS1Q96JQ0 3298 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 RPS10-NUDT3A0A1W2PQS6 291 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 IGLV1-44P01699 117 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 CRHP06850 196 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 CECR9P0C854 216 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 SRSF7Q16629 238 aaKnown RBP eCLIP15.75■□□□□ 0.11
HOXC11-201ENST00000243082 C6orf183Q5T699 404 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 Q9N2K0 584 aa15.75■□□□□ 0.11
HOXC11-201ENST00000243082 LRP5LA4QPB2 252 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 CRYM-AS1A6NIL9 109 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 MPTX1A8MV57 137 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 RP2O75695 350 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 IFNA2P01563 188 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 ZNF728P0DKX0 622 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 SELEP16581 610 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 AP2S1P53680 142 aaPredicted RBP15.74■□□□□ 0.11
HOXC11-201ENST00000243082 IL13RA2Q14627 380 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 BEND4Q6ZU67 534 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 BHLHA15Q7RTS1 189 aaPredicted RBP15.74■□□□□ 0.11
HOXC11-201ENST00000243082 SUMF2Q8NBJ7 301 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 SCCPDHQ8NBX0 429 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 TOMM40LQ969M1 308 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 ADAT1Q9BUB4 502 aaKnown RBP15.74■□□□□ 0.11
HOXC11-201ENST00000243082 OBP2BQ9NPH6 170 aa15.74■□□□□ 0.11
HOXC11-201ENST00000243082 MKRN2OSH3BPM6 223 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 HSPB6O14558 160 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 IGSF11Q5DX21 431 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 PRR14LQ5THK1 2151 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 C5orf24Q7Z6I8 188 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 SPACA1Q9HBV2 294 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 SHANK1Q9Y566 2161 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 TRAV24A0A0B4J272 114 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 LINC00862A6NCI5 91 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 OR5H1A6NKK0 313 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 H0YL77 283 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 PSMB6P28072 239 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 FXYD4P59646 89 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 CYCSP99999 105 aaKnown RBP15.73■□□□□ 0.11
HOXC11-201ENST00000243082 CLLU1Q5K131 121 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 C1orf185Q5T7R7 199 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 SGPP2Q8IWX5 399 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 MOB3AQ96BX8 217 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 RHOFQ9HBH0 211 aa15.73■□□□□ 0.11
HOXC11-201ENST00000243082 IGHV1-18A0A0C4DH31 117 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 RNF222A6NCQ9 220 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 PIGPP57054 158 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 ERVK11-1P61568 191 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 ZNF154Q13106 437 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 KCNRGQ8N5I3 272 aa15.72■□□□□ 0.11
HOXC11-201ENST00000243082 PCNPQ8WW12 178 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms