RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 KPTNQ9Y664 436 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 ANK2Q01484 3957 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 A0A1W2PQ09 198 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 C22orf46C9J442 243 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 CCRL2O00421 344 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 GABRPO00591 440 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 TK1P04183 234 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 UCHL1P09936 223 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 SRMP19623 302 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 AMY2BP19961 511 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 GABRR1P24046 479 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 PSMB9P28065 219 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 NPBWR2P48146 333 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 PSMD7P51665 324 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 FGF12P61328 243 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 COL10A1Q03692 680 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 ASCL4Q6XD76 172 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 GDPD3Q7L5L3 318 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 LINC00596Q86U02 117 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 BATF2Q8N1L9 274 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 KIR3DL3Q8N743 410 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 C8orf46Q8TAG6 207 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 TMEM203Q969S6 136 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 IL36GQ9NZH8 169 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 GSTK1Q9Y2Q3 226 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 TANC2Q9HCD6 1990 aa9.33□□□□□ -0.92
SF3B6-201ENST00000233468 TRAV8-7A0A075B6U6 113 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 A0A087WXM4 84 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 IGKV1-12A0A0C4DH73 117 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 F8VVB4 439 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 F8VWA3 439 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 K7N7A8 449 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 DEGS1O15121 323 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 SC5DO75845 299 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 TOX4O94842 621 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 HTR3BO95264 441 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 IGKV1D-12P01611 117 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 SFTPBP07988 381 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 UBBP0CG47 229 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 GTF2F2P13984 249 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 ZNF44P15621 663 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 GALP22466 123 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 RPL31P62899 125 aaKnown RBP9.32□□□□□ -0.92
SF3B6-201ENST00000233468 IL13RA2Q14627 380 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 PDCD1Q15116 288 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 AWAT2Q6E213 333 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 ASPHD2Q6ICH7 369 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 C1orf122Q6ZSJ8 110 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 LY6G5BQ8NDX9 201 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 DACT3Q96B18 629 aaPredicted RBP9.32□□□□□ -0.92
SF3B6-201ENST00000233468 UPRTQ96BW1 309 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 MRPS24Q96EL2 167 aaKnown RBP9.32□□□□□ -0.92
SF3B6-201ENST00000233468 WDFY2Q96P53 400 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 NDUFB11Q9NX14 153 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 ONECUT1Q9UBC0 465 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 OPN4Q9UHM6 478 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 NUP50Q9UKX7 468 aa9.32□□□□□ -0.92
SF3B6-201ENST00000233468 A0A1B0GW55 424 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 hADV38S2A0JD32 116 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 M0R1W7 72 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 PDCD5O14737 125 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 MGST3O14880 152 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 PIN1P1O15428 100 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 DUX4L2P0CJ85 424 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 DUX4L3P0CJ86 424 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 DUX4L4P0CJ87 422 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 DUX4L5P0CJ88 424 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 DUX4L6P0CJ89 424 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 DUX4L7P0CJ90 424 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 SELLP14151 372 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 ADRA2CP18825 462 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 MYL9P24844 172 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 OR3A4PP47883 348 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 ARF6P62330 175 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 RPS25P62851 125 aaKnown RBP9.31□□□□□ -0.92
SF3B6-201ENST00000233468 MEF2CQ06413 473 aaPredicted RBP9.31□□□□□ -0.92
SF3B6-201ENST00000233468 GRK1Q15835 563 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 NHLRC3Q5JS37 347 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 GPR157Q5UAW9 335 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 DUX4L9Q6RFH8 374 aaPredicted RBP9.31□□□□□ -0.92
SF3B6-201ENST00000233468 RBMS3Q6XE24 437 aaKnown RBP9.31□□□□□ -0.92
SF3B6-201ENST00000233468 FAM185AQ8N0U4 392 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 OR8H2Q8N162 312 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 OSR2Q8N2R0 312 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 BPIFB2Q8N4F0 458 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 Q8NFD4 153 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 OR51T1Q8NGJ9 327 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 ZNF418Q8TF45 676 aaPredicted RBP9.31□□□□□ -0.92
SF3B6-201ENST00000233468 ORAI1Q96D31 301 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 PCGF1Q9BSM1 259 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 CST11Q9H112 138 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 METTL8Q9H825 291 aaKnown RBP9.31□□□□□ -0.92
SF3B6-201ENST00000233468 SPACA1Q9HBV2 294 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 DUX4Q9UBX2 424 aa9.31□□□□□ -0.92
SF3B6-201ENST00000233468 MRPS28Q9Y2Q9 187 aaKnown RBP9.31□□□□□ -0.92
SF3B6-201ENST00000233468 A0A0A6YYJ9 748 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 TRDV1A0A1B0GX56 115 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 SIRPB1O00241 398 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 ZNF737O75373 536 aa9.3□□□□□ -0.92
SF3B6-201ENST00000233468 CDRT1O95170 752 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms