RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 ABHD3Q8WU67 409 aa8.53□□□□□ -1.04
MDH1-201ENST00000233114 GTF3AQ92664 365 aaKnown RBP8.53□□□□□ -1.04
MDH1-201ENST00000233114 ABHD14BQ96IU4 210 aa8.53□□□□□ -1.04
MDH1-201ENST00000233114 C18orf12Q96KH6 178 aa8.53□□□□□ -1.04
MDH1-201ENST00000233114 IP6K3Q96PC2 410 aa8.53□□□□□ -1.04
MDH1-201ENST00000233114 ACKR4Q9NPB9 350 aa8.53□□□□□ -1.04
MDH1-201ENST00000233114 PARP11Q9NR21 331 aa8.53□□□□□ -1.04
MDH1-201ENST00000233114 LRFN1Q9P244 771 aa8.53□□□□□ -1.04
MDH1-201ENST00000233114 TMED3Q9Y3Q3 217 aa8.53□□□□□ -1.04
MDH1-201ENST00000233114 BORCS7-ASMTA0A0B4J1R7 106 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 DUXBA0A1W2PPF3 345 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 PINLYPA6NC86 204 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 GPR137BO60478 399 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 SNAPINO95295 136 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 ACTL6AO96019 429 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 JMJD7P0C870 316 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 DUSP1P28562 367 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 FCGR2CP31995 323 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 ARR3P36575 388 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 P2RY1P47900 373 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 MPV17LQ2QL34 196 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 PIGYQ3MUY2 71 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 TSPO2Q5TGU0 170 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 RPL7L1Q6DKI1 246 aaKnown RBP8.52□□□□□ -1.05
MDH1-201ENST00000233114 SLC22A25Q6T423 547 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 BHLHE23Q8NDY6 225 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 LYPD6BQ8NI32 183 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 PIGCQ92535 297 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 MRPL24Q96A35 216 aaKnown RBP8.52□□□□□ -1.05
MDH1-201ENST00000233114 APOBEC3DQ96AK3 386 aaPredicted RBP8.52□□□□□ -1.05
MDH1-201ENST00000233114 CYYR1Q96J86 154 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 GUCD1Q96NT3 240 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 MICU1Q9BPX6 476 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 RIMS4Q9H426 269 aaPredicted RBP8.52□□□□□ -1.05
MDH1-201ENST00000233114 SLC2A9Q9NRM0 540 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 NDRG3Q9UGV2 375 aa8.52□□□□□ -1.05
MDH1-201ENST00000233114 SPTBN5Q9NRC6 3674 aaKnown RBP8.52□□□□□ -1.05
MDH1-201ENST00000233114 TNRC6AQ8NDV7 1962 aaKnown RBP8.51□□□□□ -1.05
MDH1-201ENST00000233114 KCNAB3O43448 404 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 LRP3O75074 770 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 SS18L1O75177 396 aaPredicted RBP8.51□□□□□ -1.05
MDH1-201ENST00000233114 NEURL1O76050 574 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 CDS2O95674 445 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 CTXN2P0C2S0 81 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 OR5AC1P0C628 307 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 SEC11BP0C7V7 166 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 OPRM1P35372 400 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 RAB5CP51148 216 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 F2RL1P55085 397 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 CLDN18P56856 261 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 FGF12P61328 243 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 ARF1P84077 181 aaKnown RBP8.51□□□□□ -1.05
MDH1-201ENST00000233114 FLI1Q01543 452 aaPredicted RBP8.51□□□□□ -1.05
MDH1-201ENST00000233114 RNPS1Q15287 305 aaKnown RBP8.51□□□□□ -1.05
MDH1-201ENST00000233114 HMGN3Q15651 99 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 DHRS7BQ6IAN0 325 aaPredicted RBP8.51□□□□□ -1.05
MDH1-201ENST00000233114 BTNL8Q6UX41 500 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 MKXQ8IYA7 352 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 ZNF611Q8N823 705 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 OR4A4PQ8NGN8 299 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 FGFBP3Q8TAT2 258 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 TOMM40LQ969M1 308 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 THOC3Q96J01 351 aaKnown RBP8.51□□□□□ -1.05
MDH1-201ENST00000233114 LIME1Q9H400 295 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 PLK3Q9H4B4 646 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 UQCC1Q9NVA1 299 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 RCC2Q9P258 522 aaKnown RBP8.51□□□□□ -1.05
MDH1-201ENST00000233114 FBXL17Q9UF56 701 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 AMDHD2Q9Y303 409 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 KMT2EQ8IZD2 1858 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 DNAH14Q0VDD8 3507 aa8.51□□□□□ -1.05
MDH1-201ENST00000233114 F8W036 122 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 DIRAS3O95661 229 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 PLATP00750 562 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 MBPP02686 304 aaPredicted RBP8.5□□□□□ -1.05
MDH1-201ENST00000233114 PATE4P0C8F1 98 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 RRADP55042 308 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 SPEM2Q0P670 501 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 CEACAM21Q3KPI0 293 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 CDCP2Q5VXM1 449 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 SLC25A26Q70HW3 274 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 MRPL21Q7Z2W9 205 aaKnown RBP8.5□□□□□ -1.05
MDH1-201ENST00000233114 LDLRAD3Q86YD5 345 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 CPEB3Q8NE35 698 aaKnown RBP8.5□□□□□ -1.05
MDH1-201ENST00000233114 MSI2Q96DH6 328 aaKnown RBP8.5□□□□□ -1.05
MDH1-201ENST00000233114 MARS2Q96GW9 593 aaKnown RBP8.5□□□□□ -1.05
MDH1-201ENST00000233114 ZNF845Q96IR2 970 aaPredicted RBP8.5□□□□□ -1.05
MDH1-201ENST00000233114 LOXL4Q96JB6 756 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 SPIN2AQ99865 258 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 SPIN2BQ9BPZ2 258 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 ZNF442Q9H7R0 627 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 RHOFQ9HBH0 211 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 SPACA1Q9HBV2 294 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 TREM1Q9NP99 234 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 OR2S2Q9NQN1 319 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 SLC7A10Q9NS82 523 aa8.5□□□□□ -1.05
MDH1-201ENST00000233114 FAM212BQ9NTI7 297 aaPredicted RBP8.5□□□□□ -1.05
MDH1-201ENST00000233114 TRBV6-6A0A0A6YYG2 114 aa8.49□□□□□ -1.05
MDH1-201ENST00000233114 KIR2DS1A0A191URI9 304 aa8.49□□□□□ -1.05
MDH1-201ENST00000233114 FAM74A7A6NL05 159 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms