RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 SLC16A11Q8NCK7 471 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 OR52L1Q8NGH7 329 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 RGP1Q92546 391 aaPredicted RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 FLYWCH2Q96CP2 140 aaKnown RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 MAP1LC3BQ9GZQ8 125 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 ZNF586Q9NXT0 402 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 MRPS28Q9Y2Q9 187 aaKnown RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 LSM5Q9Y4Y9 91 aaKnown RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 SHISA3A0PJX4 238 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 REM1O75628 298 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 HLA-HP01893 362 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 ADH4P08319 380 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 ID3Q02535 119 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 PLP2Q04941 152 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 PDGFRLQ15198 375 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 ENPP7Q6UWV6 458 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 C5orf17Q8NAS9 161 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 RCHY1Q96PM5 261 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 C20orf144Q9BQM9 153 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 TTTY10Q9BZA0 68 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 ISG20L2Q9H9L3 353 aaKnown RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 FSCN3Q9NQT6 498 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 MRPS18AQ9NVS2 196 aaKnown RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 MMP17Q9ULZ9 603 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 ZNF443Q9Y2A4 671 aaPredicted RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 MYO10Q9HD67 2058 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 LRRK1Q38SD2 2015 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 TRPM6Q9BX84 2022 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 DAPL1A0PJW8 107 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 IFNA1P01562 189 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 HPNP05981 417 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 TCN2P20062 427 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 FGF9P31371 208 aaPredicted RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 DRD3P35462 400 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 RPS27AP62979 156 aaKnown RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 EFNB1P98172 346 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 FZD5Q13467 585 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 CST6Q15828 149 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 CXorf66Q5JRM2 361 aaPredicted RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 ZNF322Q6U7Q0 402 aaPredicted RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 Q7L0L9 218 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 FER1L6-AS1Q8NA97 138 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 NPEPL1Q8NDH3 523 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 MFSD8Q8NHS3 518 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 MIEN1Q9BRT3 115 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 MTCL1Q9Y4B5 1905 aaKnown RBP7.3□□□□□ -1.24
SPARC-201ENST00000231061 A0A087WUJ7 227 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.3□□□□□ -1.24
SPARC-201ENST00000231061 ZNF860A6NHJ4 632 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 UNC119BA6NIH7 251 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HIST1H2BKO60814 126 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 DXOO77932 396 aaKnown RBP7.3□□□□□ -1.24
SPARC-201ENST00000231061 TSPAN15O95858 294 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HIST1H2BJP06899 126 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HIST1H2BOP23527 126 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HTR1FP30939 366 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HIST1H2BBP33778 126 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 RRADP55042 308 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HIST1H2BDP58876 126 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HIST1H2BCP62807 126 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 ZIC1Q15915 447 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HIST2H2BEQ16778 126 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.3□□□□□ -1.24
SPARC-201ENST00000231061 PRSS54Q6PEW0 395 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 MBOAT2Q6ZWT7 520 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 TCF24Q7RTU0 167 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 BEST3Q8N1M1 668 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 TMEM99Q8N816 258 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 OR6N2Q8NGY6 317 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 OR56B4Q8NH76 319 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 FGF11Q92914 225 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HIST1H2BHQ93079 126 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 PHYHIPLQ96FC7 376 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HIST1H2BNQ99877 126 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HIST1H2BMQ99879 126 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 SEC11CQ9BY50 192 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 LINC00470Q9BZP3 86 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 CBLCQ9ULV8 474 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 FOXJ3Q9UPW0 622 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 ZNF337Q9Y3M9 751 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 FOXI3A8MTJ6 420 aaPredicted RBP7.3□□□□□ -1.24
SPARC-201ENST00000231061 ZNF724A8MTY0 619 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 CDC42EP2O14613 210 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 SLC31A1O15431 190 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 ELK1P19419 428 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 F2RP25116 425 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 TAS2R30P59541 319 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 ELAVL1Q15717 326 aaKnown RBP7.3□□□□□ -1.24
SPARC-201ENST00000231061 LRRC25Q8N386 305 aaPredicted RBP7.3□□□□□ -1.24
SPARC-201ENST00000231061 SAMD12Q8N8I0 201 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 OR52D1Q9H346 318 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 RETNQ9HD89 108 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 HEATR5BQ9P2D3 2071 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 ZNF816-ZNF321PA0A0X1KG74 233 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 NKX2-6A6NCS4 301 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 SDHBP21912 280 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 REG1BP48304 166 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 UBA52P62987 128 aaKnown RBP7.3□□□□□ -1.24
SPARC-201ENST00000231061 AGERQ15109 404 aa7.3□□□□□ -1.24
SPARC-201ENST00000231061 NRN1LQ496H8 165 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms