RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 RBMXP38159 391 aaKnown RBP13.88□□□□□ -0.19
CHMP5-201ENST00000223500 GABRA2P47869 451 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 ATP5J2P56134 94 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 TMEM50BP56557 158 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 BTG1P62324 171 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 HOXA4Q00056 320 aaPredicted RBP13.88□□□□□ -0.19
CHMP5-201ENST00000223500 ZNF846Q147U1 533 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 PDCD1Q15116 288 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 CARTPTQ16568 116 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 Q6P435 159 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 OR5T2Q8NGG2 359 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 ARHGAP5-AS1Q96IT6 56 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 AKIP1Q9NQ31 210 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 ABCA12Q86UK0 2595 aa13.88□□□□□ -0.19
CHMP5-201ENST00000223500 FOXI3A8MTJ6 420 aaPredicted RBP13.87□□□□□ -0.19
CHMP5-201ENST00000223500 MCRIP1C9JLW8 97 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 PPIHO43447 177 aaKnown RBP13.87□□□□□ -0.19
CHMP5-201ENST00000223500 NDUFA2O43678 99 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 OR2H2O95918 312 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 IGHV4-39P01824 125 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 GLAP06280 429 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 GSTP1P09211 210 aaKnown RBP13.87□□□□□ -0.19
CHMP5-201ENST00000223500 HIST1H1DP16402 221 aaKnown RBP13.87□□□□□ -0.19
CHMP5-201ENST00000223500 CHATP28329 748 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 PTH2RP49190 550 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 PDLIM4P50479 330 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 MADCAM1Q13477 382 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 RBM39Q14498 530 aaKnown RBP13.87□□□□□ -0.19
CHMP5-201ENST00000223500 CDNFQ49AH0 187 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 STUMQ69YW2 141 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 SIGIRRQ6IA17 410 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 ANGPTL6Q8NI99 470 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 PPP1R35Q8TAP8 253 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 SOSTQ9BQB4 213 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 PECRQ9BY49 303 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 GSX2Q9BZM3 304 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 DNTTIP1Q9H147 329 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 BEX4Q9NWD9 120 aaPredicted RBP13.87□□□□□ -0.19
CHMP5-201ENST00000223500 RCC2Q9P258 522 aaKnown RBP13.87□□□□□ -0.19
CHMP5-201ENST00000223500 TACC2O95359 2948 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 A0A0G2JMP0 313 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 A0A0X1KG70 313 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 NKX6-3A6NJ46 265 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 SIRPB1O00241 398 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 SSX4O60224 188 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 GYPAP02724 150 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 GNB3P16520 340 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 LMO1P25800 156 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 MDH2P40926 338 aaKnown RBP13.87□□□□□ -0.19
CHMP5-201ENST00000223500 PNLIPRP3Q17RR3 467 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 ZNF260Q3ZCT1 412 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 PYDC2Q56P42 97 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 PAN3Q58A45 887 aaKnown RBP13.87□□□□□ -0.19
CHMP5-201ENST00000223500 PLAC9Q5JTB6 97 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 SNX29P2Q8IUI4 249 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 MUC20Q8N307 709 aaPredicted RBP13.87□□□□□ -0.19
CHMP5-201ENST00000223500 OR4M2Q8NGB6 313 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 ZNF665Q9H7R5 613 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 AUNIPQ9H7T9 357 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 V9GYH0 126 aa13.87□□□□□ -0.19
CHMP5-201ENST00000223500 ANKRD17O75179 2603 aaKnown RBP13.86□□□□□ -0.19
CHMP5-201ENST00000223500 IGKV1D-17A0A075B6S4 117 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 ISPDA4D126 451 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 SERPINE3A8MV23 424 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 HLA-DQB1P01920 261 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 CSF3P09919 207 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 GPR6P46095 362 aaPredicted RBP13.86□□□□□ -0.19
CHMP5-201ENST00000223500 CEBPDP49716 269 aaPredicted RBP13.86□□□□□ -0.19
CHMP5-201ENST00000223500 MRPS10P82664 201 aaKnown RBP13.86□□□□□ -0.19
CHMP5-201ENST00000223500 COL10A1Q03692 680 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 ZMYND11Q15326 602 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 ATPAF1Q5TC12 328 aaPredicted RBP13.86□□□□□ -0.19
CHMP5-201ENST00000223500 SLC36A1Q7Z2H8 476 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 C6orf201Q7Z4U5 140 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 MFSD4AQ8N468 514 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 CD177Q8N6Q3 437 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 SUMF2Q8NBJ7 301 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 NEK7Q8TDX7 302 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 PERPQ96FX8 193 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 ABHD1Q96SE0 405 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 DPCDQ9BVM2 203 aaPredicted RBP13.86□□□□□ -0.19
CHMP5-201ENST00000223500 ZMAT3Q9HA38 289 aaKnown RBP13.86□□□□□ -0.19
CHMP5-201ENST00000223500 TMEM165Q9HC07 324 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.86□□□□□ -0.19
CHMP5-201ENST00000223500 ZNF222Q9UK12 451 aa13.86□□□□□ -0.19
CHMP5-201ENST00000223500 TRAV24A0A0B4J272 114 aa13.85□□□□□ -0.19
CHMP5-201ENST00000223500 SLC33A1O00400 549 aaPredicted RBP13.85□□□□□ -0.19
CHMP5-201ENST00000223500 MFNGO00587 321 aa13.85□□□□□ -0.19
CHMP5-201ENST00000223500 CTDSPLO15194 276 aa13.85□□□□□ -0.19
CHMP5-201ENST00000223500 IGHV2-70P01814 119 aa13.85□□□□□ -0.19
CHMP5-201ENST00000223500 INHBBP09529 407 aa13.85□□□□□ -0.19
CHMP5-201ENST00000223500 PRSS3P35030 304 aa13.85□□□□□ -0.19
CHMP5-201ENST00000223500 GNG2P59768 71 aa13.85□□□□□ -0.19
CHMP5-201ENST00000223500 MRPS15P82914 257 aaKnown RBP13.85□□□□□ -0.19
CHMP5-201ENST00000223500 ARFRP1Q13795 201 aa13.85□□□□□ -0.19
CHMP5-201ENST00000223500 HACD4Q5VWC8 232 aa13.85□□□□□ -0.19
CHMP5-201ENST00000223500 ZNF561Q8N587 486 aa13.85□□□□□ -0.19
CHMP5-201ENST00000223500 ASCC1Q8N9N2 400 aaKnown RBP13.85□□□□□ -0.19
CHMP5-201ENST00000223500 ST8SIA4Q92187 359 aa13.85□□□□□ -0.19
CHMP5-201ENST00000223500 SDSLQ96GA7 329 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms