RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 TEX30Q5JUR7 227 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 RGS7BPQ6MZT1 257 aaPredicted RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 TMEFF1Q8IYR6 380 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 MTURNQ8N3F0 131 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 OR52L2PQ8NGH6 319 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 IL22RA2Q969J5 263 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 MCHR2Q969V1 340 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 C19orf24Q9BVV8 132 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 OR51B6Q9H340 312 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 ESRP2Q9H6T0 727 aaKnown RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 NTMQ9P121 344 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 FBXL17Q9UF56 701 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 A0A1B0GTL3 188 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 DBX1A6NMT0 343 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 IGHMP01871 453 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 CD99P14209 185 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 PRRX1P54821 245 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 TIAL1Q01085 375 aaKnown RBP eCLIP3.92□□□□□ -1.78
CHD9-201ENST00000219084 PMS2P11Q13670 270 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 SSPNQ14714 243 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 PACRGQ96M98 296 aaPredicted RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 MAP1LC3CQ9BXW4 147 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 CNTD2Q9H8S5 307 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 MRM2Q9UI43 246 aaKnown RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 AMDHD2Q9Y303 409 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 OR5H15A6NDH6 313 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 OR5H1A6NKK0 313 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 TXNDC12O95881 172 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 IL2RAP01589 272 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 GRPP07492 148 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 OR5AC1P0C628 307 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 FAHP16930 419 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 YBX1P67809 324 aaKnown RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 TMEM196Q5HYL7 178 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 RELL2Q8NC24 303 aaPredicted RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 GOLT1BQ9Y3E0 138 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 B4GALT3O60512 393 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 CISD3P0C7P0 127 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 NDUFB7P17568 137 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 AMTP48728 403 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 HLA-BQ31612 363 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 AWAT1Q58HT5 328 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 TOMM20LQ6UXN7 152 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 DLK2Q6UY11 383 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 MYPOPQ86VE0 399 aaPredicted RBP3.91□□□□□ -1.78
CHD9-201ENST00000219084 AKR7LQ8NHP1 331 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 RNF133Q8WVZ7 376 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 IL21Q9HBE4 155 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 LTB4R2Q9NPC1 389 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 DHCR7Q9UBM7 475 aaKnown RBP3.91□□□□□ -1.78
CHD9-201ENST00000219084 PRNDQ9UKY0 176 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 MYO7BQ6PIF6 2116 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 A0A087X0M5 115 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 CTXND1A0A1B0GTU2 59 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 A0A1B0GX30 115 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 IFNL4K9M1U5 179 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 SDCBPO00560 298 aaPredicted RBP3.91□□□□□ -1.78
CHD9-201ENST00000219084 PRRG2O14669 202 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 FFAR1O14842 300 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 ACTL6AO96019 429 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 HIST1H1BP16401 226 aaKnown RBP3.91□□□□□ -1.78
CHD9-201ENST00000219084 NAT1P18440 290 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 VEGFBP49765 207 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 FOXF1Q12946 379 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 SKP2Q13309 424 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 NSUN5P2Q63ZY6 315 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 FAAP20Q6NZ36 180 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 LRP11Q86VZ4 500 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 HOGA1Q86XE5 327 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 SAXO1Q8IYX7 474 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 KISS1RQ969F8 398 aaPredicted RBP3.91□□□□□ -1.78
CHD9-201ENST00000219084 ALG14Q96F25 216 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 FOXB1Q99853 325 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 LRRC61Q9BV99 259 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 HES4Q9HCC6 221 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 C20orf141Q9NUB4 165 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 ARL2-SNX15V9GYD0 113 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 NCOR1O75376 2440 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 PQLC2LA1A4F0 135 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 FCN1O00602 326 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 SEMA7AO75326 666 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 PNPP00491 289 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 HSPB1P04792 205 aaKnown RBP3.91□□□□□ -1.78
CHD9-201ENST00000219084 NQO2P16083 231 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 USF1P22415 310 aaPredicted RBP3.91□□□□□ -1.78
CHD9-201ENST00000219084 OPRM1P35372 400 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 LRRTM1Q86UE6 522 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 OR1L6Q8NGR2 347 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 C1QTNF6Q9BXI9 259 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 TMEM191AQ9H0A3 160 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 CXXC4Q9H2H0 198 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 LANCL2Q9NS86 450 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 H0Y980 276 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 SNRNP200O75643 2136 aaKnown RBP3.91□□□□□ -1.78
CHD9-201ENST00000219084 RELQ04864 619 aaPredicted RBP3.91□□□□□ -1.78
CHD9-201ENST00000219084 RIGQ13278 110 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 OR5I1Q13606 314 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 Q3ZCU0 254 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 FDX2Q6P4F2 183 aa3.91□□□□□ -1.78
CHD9-201ENST00000219084 AQP10Q96PS8 301 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms