RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 RAB7AP51149 207 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 CSNK2A1P68400 391 aaPredicted RBP12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 DEGS2Q6QHC5 323 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 TIPARPQ7Z3E1 657 aaKnown RBP12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 GBGT1Q8N5D6 347 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 CSNK2A3Q8NEV1 391 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 RBMXL1Q96E39 390 aaKnown RBP12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 WFIKKN1Q96NZ8 548 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 PYGO2Q9BRQ0 406 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 ST6GALNAC5Q9BVH7 336 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 CTDSP1Q9GZU7 261 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 MSL2Q9HCI7 577 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 GPR27Q9NS67 375 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 LOC102723971A0A1B0GUV8 181 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 ZNF705FA8MVS1 300 aaPredicted RBP12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 SRSF10O75494 262 aaKnown RBP12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 NXPH2O95156 264 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 UMODP07911 640 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 ZNF705DP0CH99 300 aaPredicted RBP12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 ZNF705BP0CI00 300 aaPredicted RBP12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 ZNF43P17038 809 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 COL5A1-AS1Q5SY13 56 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 GPR119Q8TDV5 335 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 TBX15Q96SF7 602 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 ABHD6Q9BV23 337 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 MRPL22Q9NWU5 206 aaKnown RBP12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 R4GMQ9 66 aa12.96□□□□□ -0.33
TMEM38A-201ENST00000187762 OR6A2O95222 327 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 IL33O95760 270 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 TUBG1P23258 451 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 WNT5AP41221 380 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 SELENOTP62341 195 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 ADPRHL1Q8NDY3 354 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 LIPHQ8WWY8 451 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 TMEM37Q8WXS4 190 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 SDF2L1Q9HCN8 221 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 G6PC2Q9NQR9 355 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 GPR84Q9NQS5 396 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 FBLN5Q9UBX5 448 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 LOC101059948A0A1B0GTJ6 334 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 C20orf202A1L168 122 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 P2RY10O00398 339 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 MPIG6BO95866 241 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 ISG15P05161 165 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 PFN1P07737 140 aaKnown RBP12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 CHRNB4P30926 498 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 CEACAM8P31997 349 aaPredicted RBP12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 LTBRP36941 435 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 CCR5P51681 352 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 EFNA3P52797 238 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 TMEM50BP56557 158 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 TAS2R46P59540 309 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 GNB2P62879 340 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 ARFRP1Q13795 201 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 IL13RA2Q14627 380 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 TMEM123Q8N131 208 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 C20orf144Q9BQM9 153 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 CALHM2Q9HA72 323 aa12.95□□□□□ -0.34
TMEM38A-201ENST00000187762 A0A1W2PPC4 97 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 CRYM-AS1A6NIL9 109 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 HCRTR2O43614 444 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 CEACAM1P13688 526 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 IDH3GP51553 393 aaPredicted RBP12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 SNU13P55769 128 aaKnown RBP12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 EWSR1Q01844 656 aaKnown RBP eCLIP12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 TGIF2LYQ8IUE0 185 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 SULF2Q8IWU5 870 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 SVIPQ8NHG7 77 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 LMX1AQ8TE12 382 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 NKX6-3A6NJ46 265 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 BLKP51451 505 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 ZNF266Q14584 549 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 RIPPLY2Q5TAB7 128 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 OR14L1PQ8NHC6 308 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 ADAMTS18Q8TE60 1221 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 FAM122AQ96E09 287 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 ARHGAP5-AS1Q96IT6 56 aa12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 GSX1Q9H4S2 264 aaPredicted RBP12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 CHD3Q12873 2000 aaKnown RBP12.94□□□□□ -0.34
TMEM38A-201ENST00000187762 BLACEA4D250 179 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 CCL25O15444 150 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 BGLAPP02818 100 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 DBHP09172 617 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 GZMHP20718 246 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 ERVS71-1P61550 626 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 FOXK1P85037 733 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 RNF144BQ7Z419 303 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 FBXL14Q8N1E6 418 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 FUT9Q9Y231 359 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 ASXL3Q9C0F0 2248 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 TRBV11-1A0A0K0K1C0 115 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 TNFSF13O75888 250 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 NUDT14O95848 222 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 GALNSP34059 522 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 CSNK1A1P48729 337 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 NECAP1Q8NC96 275 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 OR52N5Q8NH56 324 aa12.93□□□□□ -0.34
TMEM38A-201ENST00000187762 SDSLQ96GA7 329 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms