RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 FBXL14Q8N1E6 418 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 CPT1CQ8TCG5 803 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 IP6K3Q96PC2 410 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 SCGB3A2Q96PL1 93 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 NUDT16L1Q9BRJ7 211 aaKnown RBP11.37□□□□□ -0.59
CTNS-201ENST00000046640 METTL9Q9H1A3 318 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTNS-201ENST00000046640 AK3Q9UIJ7 227 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 RFNGQ9Y644 331 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 DSPP15924 2871 aaKnown RBP11.37□□□□□ -0.59
CTNS-201ENST00000046640 COLCA2A8K830 154 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 ZNF850A8MQ14 1090 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 FOXI3A8MTJ6 420 aaPredicted RBP11.37□□□□□ -0.59
CTNS-201ENST00000046640 S100A6P06703 90 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 CST2P09228 141 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 RBP2P50120 134 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 GFRA1P56159 465 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 SMCO1Q147U7 214 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 GGNBP1Q5YKI7 109 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 PLCXD3Q63HM9 321 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 SMIM8Q96KF7 97 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 CNTNAP3Q9BZ76 1288 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 LIME1Q9H400 295 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 KIAA1549Q9HCM3 1950 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 A0A1W2PPE3 182 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 FIGNL2A6NMB9 653 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 TSPAN15O95858 294 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 PRH1P02810 166 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 ARG1P05089 322 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 PET100P0DJ07 73 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 CEBPGP53567 150 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 ARF1P84077 181 aaKnown RBP11.36□□□□□ -0.59
CTNS-201ENST00000046640 FAM3AP98173 230 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 MIDNQ504T8 468 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 ACTBL2Q562R1 376 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 RPUSD3Q6P087 351 aaKnown RBP11.36□□□□□ -0.59
CTNS-201ENST00000046640 LHFPL1Q86WI0 220 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 SGPP2Q8IWX5 399 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 HSD17B11Q8NBQ5 300 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 OR2M7Q8NG81 312 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 Q96M66 194 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 PRRG4Q9BZD6 226 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 MEMO1Q9Y316 297 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 EDN3P14138 238 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 TAS2R46P59540 309 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 HABP2Q14520 560 aaPredicted RBP11.36□□□□□ -0.59
CTNS-201ENST00000046640 OR1C1Q15619 314 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 CALHM1Q8IU99 346 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 CD300LFQ8TDQ1 290 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 EMG1Q92979 244 aaKnown RBP11.36□□□□□ -0.59
CTNS-201ENST00000046640 C1orf123Q9NWV4 160 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 GHRLQ9UBU3 117 aa11.36□□□□□ -0.59
CTNS-201ENST00000046640 CNOT1A5YKK6 2376 aaKnown RBP11.35□□□□□ -0.59
CTNS-201ENST00000046640 LAMA5O15230 3695 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 hCG_1809904A0A1W2PP81 198 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 A0A1W2PR64 198 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 A0A1W2PRV1 198 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 OR6C6A6NF89 314 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 A6NLC8 198 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 SERPINE3A8MV23 424 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 HSPB6O14558 160 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 SP9P0CG40 484 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 PLGLB1Q02325 96 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 SH3BGRL3Q9H299 93 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 SPACA1Q9HBV2 294 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 CRIM1Q9NZV1 1036 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 BOKQ9UMX3 212 aaPredicted RBP11.35□□□□□ -0.59
CTNS-201ENST00000046640 RCL1Q9Y2P8 373 aaKnown RBP11.35□□□□□ -0.59
CTNS-201ENST00000046640 FBXO7Q9Y3I1 522 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 ZFHX4Q86UP3 3567 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 A0A1W2PPH5 198 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 ZNF503-AS2A6NEH8 195 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 FABP1P07148 127 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 FCGR3AP08637 254 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 NPBWR2P48146 333 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 PIGPP57054 158 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 OR2B8PP59922 312 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 RAB5BP61020 215 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 IGFBP7Q16270 282 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 ABLIM2Q6H8Q1 611 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 EIF5AL1Q6IS14 154 aaKnown RBP11.35□□□□□ -0.59
CTNS-201ENST00000046640 OR5L1Q8NGL2 311 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 CPNE4Q96A23 557 aaPredicted RBP11.35□□□□□ -0.59
CTNS-201ENST00000046640 PRRX2Q99811 253 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 ANAPC10Q9UM13 185 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 ST3GAL6Q9Y274 331 aa11.35□□□□□ -0.59
CTNS-201ENST00000046640 C5orf49A4QMS7 147 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 IFNA21P01568 189 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 OR5H8P0DN80 308 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 OR13C7P0DN81 318 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 ALDH3B1P43353 468 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 SULT1A2P50226 295 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 FAM189A2Q15884 450 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 DCAF10Q5QP82 559 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 BTNL8Q6UX41 500 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 SLC25A26Q70HW3 274 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 LYZL2Q7Z4W2 148 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 OR10AD1Q8NGE0 317 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 SAT2Q96F10 170 aaPredicted RBP11.34□□□□□ -0.59
CTNS-201ENST00000046640 MARS2Q96GW9 593 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms