RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TRBV6-6A0A0A6YYG2 114 aa12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 CTSDP07339 412 aaPredicted RBP12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 PRKACAP17612 351 aa12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 NAAAQ02083 359 aa12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 ALKBH6Q3KRA9 238 aa12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 ZNF718Q3SXZ3 478 aa12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 BRICD5Q6PL45 260 aa12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 Q6ZPA2 131 aa12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 DOLPP1Q86YN1 238 aa12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 CISD2Q8N5K1 135 aaKnown RBP12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 SPERTQ8NA61 448 aa12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 DYRK2Q92630 601 aa12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 WDR89Q96FK6 387 aaPredicted RBP12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 ZNF2Q9BSG1 426 aaPredicted RBP12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 TMEM100Q9NV29 134 aa12.19□□□□□ -0.46
RTFDC1-201ENST00000023939 APC2O95996 2303 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 INTS1Q8N201 2190 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 A8MXE2 369 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 MCRIP1C9JLW8 97 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 NOS1APO75052 506 aaPredicted RBP12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 RPS2P15880 293 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 C4BPBP20851 252 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 VAMP1P23763 118 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 IKZF1Q13422 519 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 PDCD1Q15116 288 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 OR8G1Q15617 311 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 C3P1Q6ZMU1 363 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 ZNF767PQ75MW2 155 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 SCCPDHQ8NBX0 429 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 S100PBPQ96BU1 408 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 USB1Q9BQ65 265 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 NRIP2Q9BQI9 281 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 Q9N2K0 584 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 TUBD1Q9UJT1 453 aa12.18□□□□□ -0.46
RTFDC1-201ENST00000023939 RHBDL1O75783 438 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 PGA5P0DJD9 388 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 UCP3P55916 312 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 GMFBP60983 142 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 SUPT4H1P63272 117 aaKnown RBP12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 FGL1Q08830 312 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 ZNF154Q13106 437 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 SHEQ5VZ18 495 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 SLC22A25Q6T423 547 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 TLNRD1Q9H1K6 362 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 CXXC4Q9H2H0 198 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 CLEC4MQ9H2X3 399 aaPredicted RBP12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 HEXA-AS1Q9H8Q6 139 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 IL36RNQ9UBH0 155 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 C14orf166Q9Y224 244 aaKnown RBP12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 FAM221AA4D161 298 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 RFPL4AA6NLU0 287 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 RFPL4AL1F8VTS6 287 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 GLRA1P23415 457 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 NFYAP23511 347 aaPredicted RBP12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 SEC61A1P61619 476 aaKnown RBP12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 RBM39Q14498 530 aaKnown RBP12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 Q6P435 159 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 CLEC18BQ6UXF7 455 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 MRGPRGQ86SM5 289 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 BATF2Q8N1L9 274 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 SUMF2Q8NBJ7 301 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 MUCL1Q96DR8 90 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 ZNF488Q96MN9 340 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 LIME1Q9H400 295 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 TREM2Q9NZC2 230 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 AKAP13Q12802 2813 aa12.17□□□□□ -0.46
RTFDC1-201ENST00000023939 TRAV24A0A0B4J272 114 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 KIR2DS1A0A191URI9 304 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 MLNRO43193 412 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 PGAM2P15259 253 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 GCH1P30793 250 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 KIR2DS4P43632 304 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 ZNF81P51508 661 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 ZNF146Q15072 292 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 TMEM65Q6PI78 240 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 GFRALQ6UXV0 394 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 POC1AQ8NBT0 407 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 COQ8AQ8NI60 647 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 CASTOR1Q8WTX7 329 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 MOB3AQ96BX8 217 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 PIK3IP1Q96FE7 263 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 WDR13Q9H1Z4 485 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 HES4Q9HCC6 221 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 RAB18Q9NP72 206 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 ELOVL5Q9NYP7 299 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 SLC23A1Q9UHI7 598 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 CELSR3Q9NYQ7 3312 aa12.16□□□□□ -0.46
RTFDC1-201ENST00000023939 C1QTNF9BB2RNN3 333 aa12.15□□□□□ -0.46
RTFDC1-201ENST00000023939 TIMM8AO60220 97 aaPredicted RBP12.15□□□□□ -0.46
RTFDC1-201ENST00000023939 CTXN2P0C2S0 81 aa12.15□□□□□ -0.46
RTFDC1-201ENST00000023939 PI3P19957 117 aa12.15□□□□□ -0.46
RTFDC1-201ENST00000023939 MDH2P40926 338 aaKnown RBP12.15□□□□□ -0.46
RTFDC1-201ENST00000023939 GLP1RP43220 463 aa12.15□□□□□ -0.46
RTFDC1-201ENST00000023939 MZT1Q08AG7 82 aa12.15□□□□□ -0.46
RTFDC1-201ENST00000023939 BAMBIQ13145 260 aa12.15□□□□□ -0.46
RTFDC1-201ENST00000023939 SPIN3Q5JUX0 258 aa12.15□□□□□ -0.46
RTFDC1-201ENST00000023939 ZNF880Q6PDB4 577 aa12.15□□□□□ -0.46
RTFDC1-201ENST00000023939 SNRNP40Q96DI7 357 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms