RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Hoga1Q9DCU9 321 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 PaplnQ9EPX2 1280 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Angptl4Q9Z1P8 410 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cd200O54901 278 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 GusbP12265 648 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ffar1Q76JU9 300 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Sertm1Q8CD78 107 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Asb16Q8VHS5 453 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Pttg1Q9CQJ7 199 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Smim23Q9DAL0 136 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tas2r105Q9JKT4 300 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 PthQ9Z0L6 115 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Bpnt1Q9Z0S1 308 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 L3mbtl4B1B1A0 621 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr869E9PX82 323 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 SdcbpO08992 299 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Wdr1O88342 606 aaKnown RBP10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Lhfpl5Q4KL25 219 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Kiaa1671Q8BRV5 308 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Pias2Q8C5D8 621 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r37Q8R2E4 302 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 NtpcrQ9CQA9 190 aaKnown RBP10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ccr9Q9WUT7 369 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Znf106O88466 1888 aa10.83□□□□□ -0.67
Trim56-201ENSMUST00000054384 Phf3B2RQG2 2025 aaKnown RBP10.83□□□□□ -0.67
Trim56-201ENSMUST00000054384 Trav8n-2A0A075B633 112 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr608E9Q564 316 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Syngr2O55101 224 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 H2-T3P14432 384 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ptx3P48759 381 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Mcts2Q9CQ21 181 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Bola1Q9D8S9 137 aaKnown RBP10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fgf22Q9ESS2 162 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Dcst2A0A140LIJ0 701 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr571E9Q407 322 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Hprt1P00493 218 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 PtgirP43252 415 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Spns1Q8R0G7 528 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1393Q8VFA7 311 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 TsfmQ9CZR8 324 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 TertO70372 1122 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Kcnab1P63143 401 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Klf3Q60980 344 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 RnasekQ8K3C0 98 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 NcmapQ99JS0 100 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fam210bQ9D8B6 190 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Iqcf5Q9DAL7 148 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm5286E0CXI6 357 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Cox7a2P48771 83 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Icam5Q60625 917 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr198Q7TS40 306 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1048Q8VGS2 320 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm14597A2CFG5 200 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Il12rb2P97378 874 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp7Q3TFZ4 685 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Wdr34Q5U4F6 535 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ly6eQ64253 130 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr374Q7TRY0 313 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr786Q8VFH8 312 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Dock2Q8C3J5 1828 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr485A0A140LJF5 317 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm5916G5E8W5 102 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 P01810 119 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Crisp2P16563 243 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Pcolce2Q8R4W6 414 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Chac2Q9CQG1 178 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Plekha2Q9ERS5 425 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 EdarQ9R187 448 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ckap5A2AGT5 2032 aaKnown RBP10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gosr1O88630 250 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Lgals1P16045 135 aaKnown RBP10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Isl1P61372 349 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Med25Q8VCB2 745 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tmem45bQ8VCZ2 278 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1420Q8VF55 309 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Q9DAE8 263 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nova1Q9JKN6 507 aaKnown RBP10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr157Q9QZ20 318 aa10.83□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp971A2BFG8 470 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ceacam16E9QA28 426 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Avpr2O88721 371 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ube2mP61082 183 aaKnown RBP10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp970Q08BU3 522 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fzd8Q61091 685 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Vmn1r230Q8R2A2 316 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 TMEM121BQ99MX7 572 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Cd302Q9DCG2 228 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Rarres2Q9DD06 162 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Cpn1Q9JJN5 457 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Clec1bQ9JL99 229 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Psmb2Q9R1P3 201 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Klk1b9P15949 261 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Dusp1P28563 367 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fpr1P33766 364 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Q3U595 105 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 MENTQ569E4 350 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 CcnqQ8QZR8 250 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Vmn1r179Q8R2B4 323 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 HeylQ9DBX7 326 aa10.82□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zbp1Q9QY24 411 aa10.82□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 58.3 ms