RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 FAM46BQ96A09 425 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 C1orf159Q96HA4 380 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 CEP19Q96LK0 163 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 MRI1Q9BV20 369 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 CST11Q9H112 138 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 GCM1Q9NP62 436 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 TREM2Q9NZC2 230 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 IL36GQ9NZH8 169 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 MTCH1Q9NZJ7 389 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 GHRLQ9UBU3 117 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 PPP1R3CQ9UQK1 317 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 CACNG2Q9Y698 323 aa7.89□□□□□ -1.15
PHGDH-228ENST00000641847 NBEAL2Q6ZNJ1 2754 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 A0A075B6Q4 140 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 IGHV1-69-2A0A0G2JMI3 117 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 LRRC30A6NM36 301 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 TRAPPC2LH3BP13 241 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 NDUFS8O00217 210 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 LDLRAD4O15165 306 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 CDC14BO60729 498 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 HPGDSO60760 199 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 ZNF780AO75290 641 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-228ENST00000641847 HTR3BO95264 441 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 MPIG6BO95866 241 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 CYB5R3P00387 301 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-228ENST00000641847 CSTBP04080 98 aaKnown RBP7.88□□□□□ -1.15
PHGDH-228ENST00000641847 VSIG8P0DPA2 414 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 PMELP40967 661 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 CAPZA1P52907 286 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 SCAND1P57086 179 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 GMFBP60983 142 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 QRFPP83859 136 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 HOXA4Q00056 320 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-228ENST00000641847 UNC119Q13432 240 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 C2orf76Q3KRA6 126 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 UBE2NLQ5JXB2 153 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 PRR31Q5SQ13 230 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 OR2W3Q7Z3T1 314 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 SAMD12Q8N8I0 201 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 BOLLQ8N9W6 283 aaKnown RBP7.88□□□□□ -1.15
PHGDH-228ENST00000641847 OR10Z1Q8NGY1 313 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 NEU4Q8WWR8 484 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-228ENST00000641847 HPS1Q92902 700 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 EMG1Q92979 244 aaKnown RBP7.88□□□□□ -1.15
PHGDH-228ENST00000641847 MSI2Q96DH6 328 aaKnown RBP7.88□□□□□ -1.15
PHGDH-228ENST00000641847 GAL3ST1Q99999 423 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 NRIP2Q9BQI9 281 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 PIMREGQ9BSJ6 248 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 BANF2Q9H503 90 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 RBFOX1Q9NWB1 397 aaKnown RBP7.88□□□□□ -1.15
PHGDH-228ENST00000641847 RNF7Q9UBF6 113 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 METRNQ9UJH8 293 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 SPATA2Q9UM82 520 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 A3GALT2U3KPV4 340 aa7.88□□□□□ -1.15
PHGDH-228ENST00000641847 DYSFO75923 2080 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 TMEM14DPA8MWL7 114 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 SRRM5B3KS81 715 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 FAM157AC9JC47 383 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 C3orf80F5H4A9 247 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 F8VVB4 439 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 F8VWA3 439 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 WNT9BO14905 357 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 RGS5O15539 181 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 AKR7A2O43488 359 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 CLPXO76031 633 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 LY6HO94772 140 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 NXPH2O95156 264 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 EIF4EP06730 217 aaKnown RBP7.87□□□□□ -1.15
PHGDH-228ENST00000641847 GTF2F2P13984 249 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 MGMTP16455 207 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 PRKACAP17612 351 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 RAB6AP20340 208 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 GLRA1P23415 457 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 CD80P33681 288 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 RBMXP38159 391 aaKnown RBP7.87□□□□□ -1.15
PHGDH-228ENST00000641847 PDLIM4P50479 330 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 BMXP51813 675 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 EFNA4P52798 201 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 EFNB2P52799 333 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 SNU13P55769 128 aaKnown RBP7.87□□□□□ -1.15
PHGDH-228ENST00000641847 FGF12P61328 243 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 ERVK11-1P61568 191 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 GPR176Q14439 515 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 ZNF181Q2M3W8 571 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 PIGYQ3MUY2 71 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 LAX1Q8IWV1 398 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 Q8IYB0 196 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 OSR2Q8N2R0 312 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 TMEM104Q8NE00 496 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 KCNG3Q8TAE7 436 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 CCL17Q92583 94 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 SLC25A38Q96DW6 304 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 TMEM59Q9BXS4 323 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 SELENOIQ9C0D9 397 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 MIXL1Q9H2W2 232 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 MMP27Q9H306 513 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 PCDHB16Q9NRJ7 776 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 RHBDL2Q9NX52 303 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 DCAF16Q9NXF7 216 aa7.87□□□□□ -1.15
PHGDH-228ENST00000641847 IL36RNQ9UBH0 155 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms