RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 H7C417 338 aa16.7■□□□□ 0.26
PHGDH-210ENST00000641115 IFNL4K9M1U5 179 aa16.7■□□□□ 0.26
PHGDH-210ENST00000641115 HPXP02790 462 aa16.7■□□□□ 0.26
PHGDH-210ENST00000641115 HIST1H1DP16402 221 aaKnown RBP16.7■□□□□ 0.26
PHGDH-210ENST00000641115 EGR1P18146 543 aa16.7■□□□□ 0.26
PHGDH-210ENST00000641115 MRPS10P82664 201 aaKnown RBP16.7■□□□□ 0.26
PHGDH-210ENST00000641115 NKAPLQ5M9Q1 402 aa16.7■□□□□ 0.26
PHGDH-210ENST00000641115 Q8N402 240 aa16.7■□□□□ 0.26
PHGDH-210ENST00000641115 NEU4Q8WWR8 484 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-210ENST00000641115 CCDC32Q9BV29 185 aa16.7■□□□□ 0.26
PHGDH-210ENST00000641115 ZMAT3Q9HA38 289 aaKnown RBP16.7■□□□□ 0.26
PHGDH-210ENST00000641115 PLEKHJ1Q9NW61 149 aa16.7■□□□□ 0.26
PHGDH-210ENST00000641115 HRNRQ86YZ3 2850 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-210ENST00000641115 FOXI3A8MTJ6 420 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-210ENST00000641115 CTDSPLO15194 276 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 CYB5R3P00387 301 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-210ENST00000641115 LHBP01229 141 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 GNB3P16520 340 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 DUSP1P28562 367 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 ZNF146Q15072 292 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 CDNFQ49AH0 187 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 PLAC9Q5JTB6 97 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 ATAD3CQ5T2N8 411 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 FAM90A1Q86YD7 464 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 CCL17Q92583 94 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 ARHGAP5-AS1Q96IT6 56 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 AUNIPQ9H7T9 357 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 SPACA1Q9HBV2 294 aa16.69■□□□□ 0.26
PHGDH-210ENST00000641115 TMEM235A6NFC5 223 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 PDCD6O75340 191 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 KNG1P01042 644 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 GSTP1P09211 210 aaKnown RBP16.68■□□□□ 0.26
PHGDH-210ENST00000641115 COL8A1P27658 744 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 TMEM50BP56557 158 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 HOXA4Q00056 320 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-210ENST00000641115 SCN1BQ07699 218 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 PDCD1Q15116 288 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 HFEQ30201 348 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 ZNF260Q3ZCT1 412 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 SIGIRRQ6IA17 410 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 OR8H2Q8N162 312 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 C14orf79Q96F83 325 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 SDHCQ99643 169 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-210ENST00000641115 TMEM106BQ9NUM4 274 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 OR14J1Q9UGF5 321 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 HSF4Q9ULV5 492 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 LRRK2Q5S007 2527 aa16.68■□□□□ 0.26
PHGDH-210ENST00000641115 MFNGO00587 321 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 SH2D1BO14796 132 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 PTHLHP12272 177 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 ZNF44P15621 663 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 FUT3P21217 361 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 CHATP28329 748 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 PRSS3P35030 304 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 RBMXP38159 391 aaKnown RBP16.67■□□□□ 0.26
PHGDH-210ENST00000641115 CDKN1AP38936 164 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 C16orf87Q6PH81 154 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 C6orf201Q7Z4U5 140 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 TGIF2LYQ8IUE0 185 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 FCAMRQ8WWV6 532 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 GCDHQ92947 438 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-210ENST00000641115 PSMG3-AS1Q96PY0 264 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 PECRQ9BY49 303 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 CXorf56Q9H5V9 222 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 IFT22Q9H7X7 185 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 NLKQ9UBE8 527 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 CACNG2Q9Y698 323 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 SERPINE3A8MV23 424 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 GABARAPH6UMI1 98 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-210ENST00000641115 DEGS1O15121 323 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 HAND1O96004 215 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 CD80P33681 288 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 DCTN2Q13561 401 aaKnown RBP16.67■□□□□ 0.26
PHGDH-210ENST00000641115 RNASE12Q5GAN4 147 aaKnown RBP16.67■□□□□ 0.26
PHGDH-210ENST00000641115 ZNF295-AS1Q8N0V1 137 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 SMIM4Q8WVI0 70 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 SEH1LQ96EE3 360 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 CCL19Q99731 98 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.67■□□□□ 0.26
PHGDH-210ENST00000641115 ZNF581Q9P0T4 197 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 PLEKHA6Q9Y2H5 1048 aa16.67■□□□□ 0.26
PHGDH-210ENST00000641115 SPTAN1Q13813 2472 aaKnown RBP16.67■□□□□ 0.26
PHGDH-210ENST00000641115 TMEM178BH3BS89 294 aa16.66■□□□□ 0.26
PHGDH-210ENST00000641115 GNG2P59768 71 aa16.66■□□□□ 0.26
PHGDH-210ENST00000641115 MICBQ29980 383 aa16.66■□□□□ 0.26
PHGDH-210ENST00000641115 HACD4Q5VWC8 232 aa16.66■□□□□ 0.26
PHGDH-210ENST00000641115 TRIQKQ629K1 86 aa16.66■□□□□ 0.26
PHGDH-210ENST00000641115 ABCB10Q9NRK6 738 aa16.66■□□□□ 0.26
PHGDH-210ENST00000641115 RCC2Q9P258 522 aaKnown RBP16.66■□□□□ 0.26
PHGDH-210ENST00000641115 KCNK7Q9Y2U2 307 aa16.66■□□□□ 0.26
PHGDH-210ENST00000641115 WIPI2Q9Y4P8 454 aa16.66■□□□□ 0.26
PHGDH-210ENST00000641115 OR2AT4A6NND4 320 aa16.65■□□□□ 0.26
PHGDH-210ENST00000641115 GSTZ1O43708 216 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-210ENST00000641115 UPK1BO75841 260 aa16.65■□□□□ 0.26
PHGDH-210ENST00000641115 OR2H2O95918 312 aa16.65■□□□□ 0.26
PHGDH-210ENST00000641115 MELTFP08582 738 aa16.65■□□□□ 0.26
PHGDH-210ENST00000641115 MUC1P15941 1255 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-210ENST00000641115 DGCR2P98153 550 aa16.65■□□□□ 0.26
PHGDH-210ENST00000641115 ARFRP1Q13795 201 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms