RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 LIMS3P0CW19 117 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 LIMS4P0CW20 117 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 PLA1AQ53H76 456 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 DHRS7BQ6IAN0 325 aaPredicted RBP14.4□□□□□ -0.1
PNKP-230ENST00000638016 LHFPL2Q6ZUX7 228 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 C10orf67Q8IYJ2 551 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 OR8H2Q8N162 312 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 FAM58AQ8N1B3 248 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 DYNAPQ8N1N2 210 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 SYS1Q8N2H4 156 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 BEND2Q8NDZ0 799 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 RGP1Q92546 391 aaPredicted RBP14.4□□□□□ -0.1
PNKP-230ENST00000638016 SSX3Q99909 188 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 PPA2Q9H2U2 334 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 SMPD3Q9NY59 655 aaPredicted RBP14.4□□□□□ -0.1
PNKP-230ENST00000638016 RNF114Q9Y508 228 aa14.4□□□□□ -0.1
PNKP-230ENST00000638016 MEGF11A6BM72 1044 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 BTBD17A6NE02 478 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 C17orf98A8MV24 154 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 SIRPB1O00241 398 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 MPZL2O60487 215 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 FADS2O95864 444 aaKnown RBP14.39□□□□□ -0.11
PNKP-230ENST00000638016 PRKACBP22694 351 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 GABRR1P24046 479 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 RAB40BQ12829 278 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 PDZK1IP1Q13113 114 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 ZSCAN26Q16670 478 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 MIDNQ504T8 468 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 OR2G6Q5TZ20 316 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 HIST2H2BDQ6DRA6 164 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 ASPHD2Q6ICH7 369 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 GDPGP1Q6ZNW5 385 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 GDPD3Q7L5L3 318 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 ZSCAN4Q8NAM6 433 aaPredicted RBP14.39□□□□□ -0.11
PNKP-230ENST00000638016 PPP1R35Q8TAP8 253 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 SPSB1Q96BD6 273 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 SNX22Q96L94 193 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 Q96MT0 163 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 ZNF696Q9H7X3 374 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 MRPS18AQ9NVS2 196 aaKnown RBP14.39□□□□□ -0.11
PNKP-230ENST00000638016 GSTK1Q9Y2Q3 226 aa14.39□□□□□ -0.11
PNKP-230ENST00000638016 A0A1B0GUS0 222 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 OCM2P0CE71 109 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 OCMP0CE72 109 aaPredicted RBP14.38□□□□□ -0.11
PNKP-230ENST00000638016 JUNBP17275 347 aaPredicted RBP14.38□□□□□ -0.11
PNKP-230ENST00000638016 PEX2P28328 305 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 OR3A1P47881 315 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 ETV1P50549 477 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 PROK1P58294 105 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 GRK1Q15835 563 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 BRICD5Q6PL45 260 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 BAIAP2L2Q6UXY1 529 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 STMN2Q93045 179 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 ZCCHC4Q9H5U6 513 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 HEXA-AS1Q9H8Q6 139 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.38□□□□□ -0.11
PNKP-230ENST00000638016 SIGLEC9Q9Y336 463 aa14.38□□□□□ -0.11
PNKP-230ENST00000638016 RPL36Q9Y3U8 105 aaKnown RBP14.38□□□□□ -0.11
PNKP-230ENST00000638016 A0A1W2PPH5 198 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 ANKRD65E5RJM6 399 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 MMP23AO75900 390 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 ZNF728P0DKX0 622 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 SOX2P48431 317 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 ZP1P60852 638 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 RPL15P61313 204 aaKnown RBP14.37□□□□□ -0.11
PNKP-230ENST00000638016 IL18R1Q13478 541 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 ZNF146Q15072 292 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 ZNF691Q5VV52 312 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 ZNF555Q8NEP9 628 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 OR51A2Q8NGJ7 313 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 OR5AK2Q8NH90 309 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 TSEN15Q8WW01 171 aaKnown RBP14.37□□□□□ -0.11
PNKP-230ENST00000638016 CITED1Q99966 193 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 NEK6Q9HC98 313 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 HMG20AQ9NP66 347 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 INPP5EQ9NRR6 644 aa14.37□□□□□ -0.11
PNKP-230ENST00000638016 SIRT4Q9Y6E7 314 aaPredicted RBP14.37□□□□□ -0.11
PNKP-230ENST00000638016 TMEM212A6NML5 194 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 CHST1O43916 411 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 KDM4BO94953 1096 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 OR2H2O95918 312 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 CYB5AP00167 134 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 MT-ND2P03891 347 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 ARG1P05089 322 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 IGHV1-8P0DP01 117 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 RAB13P51153 203 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 GBX2P52951 348 aaPredicted RBP14.36□□□□□ -0.11
PNKP-230ENST00000638016 RCN1Q15293 331 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 LRRC75BQ2VPJ9 315 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 Q8IYB0 196 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 OR5R1Q8NH85 324 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 PIFOQ8TCI5 191 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 CYGBQ8WWM9 190 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 ORAI1Q96D31 301 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 MRPL48Q96GC5 212 aaKnown RBP14.36□□□□□ -0.11
PNKP-230ENST00000638016 ZNF714Q96N38 554 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 MEGF9Q9H1U4 602 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 FGF20Q9NP95 211 aaPredicted RBP14.36□□□□□ -0.11
PNKP-230ENST00000638016 ING3Q9NXR8 418 aa14.36□□□□□ -0.11
PNKP-230ENST00000638016 CLEC2DQ9UHP7 191 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms