RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 OR4D5Q8NGN0 318 aa18.71■□□□□ 0.59
CLN5-215ENST00000636767 ULBP2Q9BZM5 246 aa18.71■□□□□ 0.59
CLN5-215ENST00000636767 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 IGKV1-12A0A0C4DH73 117 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 PHF1O43189 567 aaPredicted RBP18.7■□□□□ 0.58
CLN5-215ENST00000636767 EIF1BO60739 113 aaKnown RBP18.7■□□□□ 0.58
CLN5-215ENST00000636767 IGKV1D-12P01611 117 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 EWSR1Q01844 656 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLN5-215ENST00000636767 CLINT1Q14677 625 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 CNN3Q15417 329 aaKnown RBP18.7■□□□□ 0.58
CLN5-215ENST00000636767 LURAP1LQ8IV03 231 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 MOB3AQ96BX8 217 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 BOD1Q96IK1 185 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 A0A1B0GW64 132 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 TOX3O15405 576 aaPredicted RBP18.7■□□□□ 0.58
CLN5-215ENST00000636767 NOVA1P51513 510 aaKnown RBP18.7■□□□□ 0.58
CLN5-215ENST00000636767 ASCL4Q6XD76 172 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 SLC35G3Q8N808 338 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 ZNF565Q8N9K5 539 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 NAXEQ8NCW5 288 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 LFNGQ8NES3 379 aa18.7■□□□□ 0.58
CLN5-215ENST00000636767 SDK1Q7Z5N4 2213 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 AP4M1O00189 453 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 TXNL1O43396 289 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 RPS23P62266 143 aaKnown RBP18.69■□□□□ 0.58
CLN5-215ENST00000636767 Q6ZPA2 131 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 MAML2Q8IZL2 1156 aaPredicted RBP18.69■□□□□ 0.58
CLN5-215ENST00000636767 ZIC4Q8N9L1 334 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 YPEL4Q96NS1 127 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 TP53RKQ96S44 253 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 RARRES2Q99969 163 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 OR51M1Q9H341 326 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 ZNF286AQ9HBT8 521 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 CA14Q9ULX7 337 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 TP53I11O14683 189 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 MAS1LP35410 378 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 RBP2P50120 134 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 RAB1AP62820 205 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 FAM209BQ5JX69 171 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 FAM27BQ5VT28 67 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 BORCS8Q96FH0 119 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 SYT3Q9BQG1 590 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 C11orf1Q9H5F2 150 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 C19orf25Q9UFG5 118 aaPredicted RBP18.69■□□□□ 0.58
CLN5-215ENST00000636767 TMED3Q9Y3Q3 217 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 RFNGQ9Y644 331 aa18.69■□□□□ 0.58
CLN5-215ENST00000636767 A0A087WZY1 265 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 VAMP5O95183 116 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 UCP3P55916 312 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 MRPS34P82930 218 aaKnown RBP18.68■□□□□ 0.58
CLN5-215ENST00000636767 RAET1LQ5VY80 246 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 MEX3BQ6ZN04 569 aaKnown RBP18.68■□□□□ 0.58
CLN5-215ENST00000636767 FBXL14Q8N1E6 418 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 MIOXQ9UGB7 285 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 RARRES3Q9UL19 164 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 TRAV20A0A0B4J274 112 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 SYNGR3O43761 229 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 CELA2AP08217 269 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 AADACP22760 399 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 RAB35Q15286 201 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 LHFPL2Q6ZUX7 228 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 OSR2Q8N2R0 312 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 TCTEX1D2Q8WW35 142 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 AKIRIN1Q9H9L7 192 aaPredicted RBP18.68■□□□□ 0.58
CLN5-215ENST00000636767 BCO1Q9HAY6 547 aa18.68■□□□□ 0.58
CLN5-215ENST00000636767 SHANK1Q9Y566 2161 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 GPR37O15354 613 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 SRFP11831 508 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 EIF2S3P41091 472 aaKnown RBP18.67■□□□□ 0.58
CLN5-215ENST00000636767 STARD6P59095 220 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 GNMTQ14749 295 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 ZNF774Q6NX45 483 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 SUMF2Q8NBJ7 301 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 NTNG2Q96CW9 530 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 PUS1Q9Y606 427 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLN5-215ENST00000636767 PPIHO43447 177 aaKnown RBP18.67■□□□□ 0.58
CLN5-215ENST00000636767 CCL20P78556 96 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 SOHLH1Q5JUK2 328 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 OR2C3Q8N628 320 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 CCDC71LQ8N9Z2 235 aa18.67■□□□□ 0.58
CLN5-215ENST00000636767 FAM24AA6NFZ4 105 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 CCDC85CA6NKD9 419 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 OR2C1O95371 312 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 HERV-K104P61576 105 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 POLR2GP62487 172 aaKnown RBP eCLIP18.66■□□□□ 0.58
CLN5-215ENST00000636767 PDCD1Q15116 288 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 C1QL4Q86Z23 238 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 ABHD14AQ9BUJ0 271 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 ST3GAL6Q9Y274 331 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 IGSF23A1L1A6 192 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 NKX2-6A6NCS4 301 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 BCAT2O15382 392 aaPredicted RBP18.66■□□□□ 0.58
CLN5-215ENST00000636767 LCATP04180 440 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 AFF3P51826 1226 aaKnown RBP18.66■□□□□ 0.58
CLN5-215ENST00000636767 TMEM42Q69YG0 159 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 HEPN1Q6WQI6 88 aa18.66■□□□□ 0.58
CLN5-215ENST00000636767 KIAA1549Q9HCM3 1950 aa18.65■□□□□ 0.58
CLN5-215ENST00000636767 ONECUT2O95948 504 aa18.65■□□□□ 0.58
CLN5-215ENST00000636767 NRASP01111 189 aa18.65■□□□□ 0.58
CLN5-215ENST00000636767 CCL3P10147 92 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms