RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 IFNA7P01567 189 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 GRPP07492 148 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 ERCC1P07992 297 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-208ENST00000634934 MELTFP08582 738 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 SRP9P49458 86 aaKnown RBP12.24□□□□□ -0.45
LINC00339-208ENST00000634934 MTCP1P56278 107 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 GNG3P63215 75 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 PCGF3Q3KNV8 242 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 LRRTM1Q86UE6 522 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 ZNF680Q8NEM1 530 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 OR52N4Q8NGI2 321 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 ITLN1Q8WWA0 313 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 PHF21AQ96BD5 680 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 MEGF10Q96KG7 1140 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 ZNF436Q9C0F3 470 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-208ENST00000634934 EGLN1Q9GZT9 426 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 RAB1BQ9H0U4 201 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 SLC23A1Q9UHI7 598 aa12.24□□□□□ -0.45
LINC00339-208ENST00000634934 ZNF107Q9UII5 783 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-208ENST00000634934 AK6Q9Y3D8 172 aaKnown RBP12.24□□□□□ -0.45
LINC00339-208ENST00000634934 SPG11Q96JI7 2443 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 RAI1Q7Z5J4 1906 aaPredicted RBP12.23□□□□□ -0.45
LINC00339-208ENST00000634934 TRAV6A0A075B6T7 132 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 LOC100289279A0A1B0GTE1 492 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 PQLC2LA1A4F0 135 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 OR2A4O95047 310 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 ADH4P08319 380 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 GIPP09681 153 aaPredicted RBP12.23□□□□□ -0.45
LINC00339-208ENST00000634934 FAUP35544 74 aaKnown RBP12.23□□□□□ -0.45
LINC00339-208ENST00000634934 CD200P41217 278 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 RBP2P50120 134 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 ART1P52961 327 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 ATP1B3P54709 279 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 SPRNQ5BIV9 151 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 FAM209AQ5JX71 171 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 PRAMEF6Q5VXH4 476 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 GLDNQ6ZMI3 551 aaPredicted RBP12.23□□□□□ -0.45
LINC00339-208ENST00000634934 LHFPL2Q6ZUX7 228 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 DNAAF1Q8NEP3 725 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 OR2A7Q96R45 310 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 GPER1Q99527 375 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 NKX3-1Q99801 234 aaPredicted RBP12.23□□□□□ -0.45
LINC00339-208ENST00000634934 SAP30LQ9HAJ7 183 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 MED9Q9NWA0 146 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 IL19Q9UHD0 177 aa12.23□□□□□ -0.45
LINC00339-208ENST00000634934 VPS13CQ709C8 3753 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 IGKV1-27A0A075B6S5 117 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 MEGF11A6BM72 1044 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 A6NLC8 198 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 H7C417 338 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 XRCC3O43542 346 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 DSCAMO60469 2012 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 RGS11O94810 467 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 PLATP00750 562 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 CD55P08174 381 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 ADRA2CP18825 462 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 RAP2BP61225 183 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 MADCAM1Q13477 382 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 ARFGEF3Q5TH69 2177 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 RNF144BQ7Z419 303 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 WDR86Q86TI4 376 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 ANGPTL5Q86XS5 388 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 JAGN1Q8N5M9 183 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 GPN1Q9HCN4 374 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-208ENST00000634934 UFSP2Q9NUQ7 469 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 OR5V1Q9UGF6 321 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 PLEKHA6Q9Y2H5 1048 aa12.22□□□□□ -0.45
LINC00339-208ENST00000634934 LRP5LA4QPB2 252 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 TMEM210A6NLX4 147 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 LEUTXA8MZ59 168 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 OVOL3O00110 214 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 NDUFB6O95139 128 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 HPXP02790 462 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 ALDOBP05062 364 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 TNFRSF1AP19438 455 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 CXCL3P19876 107 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 DNASE1P24855 282 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 ZNF93P35789 620 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-208ENST00000634934 HAAOP46952 286 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 POU3F4P49335 361 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 CAPZA1P52907 286 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 ARPC4P59998 168 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 TESK1Q15569 626 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 KISS1Q15726 138 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 MPPED2Q15777 294 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 GLT8D1Q68CQ7 371 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 HAGHLQ6PII5 290 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-208ENST00000634934 MOGAT3Q86VF5 341 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 ZNF573Q86YE8 665 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 CCDC28AQ8IWP9 274 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 CDH26Q8IXH8 852 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 NKAIN3Q8N8D7 197 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 OR11H4Q8NGC9 324 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 OR5D18Q8NGL1 313 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 OR52I2Q8NH67 350 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 OR51I2Q9H344 312 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 LIN7BQ9HAP6 207 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 TREM2Q9NZC2 230 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 ZNF222Q9UK12 451 aa12.21□□□□□ -0.45
LINC00339-208ENST00000634934 AKAP9Q99996 3911 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms