RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 ZNF621Q6ZSS3 439 aa3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 MRPL21Q7Z2W9 205 aaKnown RBP3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 ZNF547Q8IVP9 402 aa3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 MDS2Q8NDY4 140 aa3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 TMEM104Q8NE00 496 aa3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 BLOC1S5Q8TDH9 187 aa3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 EXOSC8Q96B26 276 aaKnown RBP3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 ASB9Q96DX5 294 aa3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 RHOXF2Q9BQY4 288 aa3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 ASB8Q9H765 288 aa3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 DAZ3Q9NR90 486 aaKnown RBP3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 CD84Q9UIB8 345 aa3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 COMMD3-BMI1R4GMX3 469 aa3.47□□□□□ -1.85
TRAPPC9-216ENST00000634178 TRRAPQ9Y4A5 3859 aa3.46□□□□□ -1.85
TRAPPC9-216ENST00000634178 ABCA1O95477 2261 aa3.46□□□□□ -1.85
TRAPPC9-216ENST00000634178 NOTCH1P46531 2555 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 IGLV3-12A0A075B6K2 115 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 A0A1B0GW55 424 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 A0A1B0GX78 115 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 CIB4A0PJX0 185 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 OR6C74A6NCV1 312 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 BOLA2-SMG1P6H3BVE0 249 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 OR2B3O76000 313 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 CDK14O94921 469 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 SLC25A14O95258 325 aaPredicted RBP3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 MOSP00540 346 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 DUX4L2P0CJ85 424 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 DUX4L3P0CJ86 424 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 DUX4L4P0CJ87 422 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 DUX4L5P0CJ88 424 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 DUX4L6P0CJ89 424 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 DUX4L7P0CJ90 424 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 OMGP23515 440 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 SDC4P31431 198 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 RFC3P40938 356 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 CYB561P49447 251 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 ETV1P50549 477 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 PSMD4P55036 377 aaKnown RBP3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 PSG7Q13046 419 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 PON3Q15166 354 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 ZNF726P1Q15940 193 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 ZSCAN26Q16670 478 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 TRMT5Q32P41 509 aaKnown RBP3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 GPR107Q5VW38 600 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 FAM173BQ6P4H8 233 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 DUX4L9Q6RFH8 374 aaPredicted RBP3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 NPSR1Q6W5P4 371 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 LINC00173Q6ZV60 143 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 MBOAT2Q6ZWT7 520 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 NDUFAF7Q7L592 441 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 TRAM1L1Q8N609 369 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 OR6Q1Q8NGQ2 317 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 OR10J6PQ8NGY7 276 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 APH1BQ8WW43 257 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 GPR21Q99679 349 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 STMN4Q9H169 189 aaPredicted RBP3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 OR2AG1Q9H205 316 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 XKR8Q9H6D3 395 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 TMEM38AQ9H6F2 299 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 BEX1Q9HBH7 125 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 SLCO1B3Q9NPD5 702 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 ACP6Q9NPH0 428 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 MCUBQ9NWR8 336 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 DUX4Q9UBX2 424 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 ST3GAL6Q9Y274 331 aa3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 RCL1Q9Y2P8 373 aaKnown RBP3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 YARS2Q9Y2Z4 477 aaKnown RBP3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 BZW2Q9Y6E2 419 aaKnown RBP3.46□□□□□ -1.86
TRAPPC9-216ENST00000634178 IGHV1-45A0A0A0MS14 117 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 ERI2A8K979 691 aaKnown RBP3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 CENPXA8MT69 81 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 C2orf74A8MZ97 194 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 H0YHG0 523 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 ALOX12BO75342 701 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 HPRT1P00492 218 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 UBTFL6P0CB48 400 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 OR5H8P0DN80 308 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 COX6A1P12074 109 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 GGT1P19440 569 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 SYT1P21579 422 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 PPP1R2P41236 205 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 HCAR3P49019 387 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 REG3AQ06141 175 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 DMTNQ08495 405 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 GGTLC2Q14390 218 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 MPPED2Q15777 294 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 TMEM183BQ1AE95 376 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 CHRFAM7AQ494W8 412 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 RNF212Q495C1 297 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 AADACL4Q5VUY2 407 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 TMEM183AQ8IXX5 376 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 CBR4Q8N4T8 237 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 LRRC75AQ8NAA5 344 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 RXFP2Q8WXD0 754 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 RAB1CQ92928 201 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 LRRC39Q96DD0 335 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 GALNT14Q96FL9 552 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 ZNF396Q96N95 335 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 ZNF285Q96NJ3 590 aa3.45□□□□□ -1.86
TRAPPC9-216ENST00000634178 DHCR7Q9UBM7 475 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms