RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NAA11Q9BSU3 229 aaPredicted RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 OR51B6Q9H340 312 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 TXNIPQ9H3M7 391 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 TREM2Q9NZC2 230 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 STEAP1Q9UHE8 339 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 AUP1Q9Y679 476 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 IGHV1-18A0A0C4DH31 117 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 NPIPB13A6NJU9 1138 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 A8MVM7 634 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 NPIPB4C9JG80 1138 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF587BE7ETH6 402 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 PLPP3O14495 311 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 MPGP29372 298 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 RPS27P42677 84 aaKnown RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 SOX2P48431 317 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 SELENOPP49908 381 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 BLVRAP53004 296 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 DHODHQ02127 395 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 C1orf140Q5VVS0 124 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 CARD17Q5XLA6 110 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 THOC7Q6I9Y2 204 aaKnown RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 ANKRD16Q6P6B7 361 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 C5orf46Q6UWT4 87 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 Q6ZTK2 550 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 SERPINA12Q8IW75 414 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 DNAAF1Q8NEP3 725 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 TMEM106AQ96A25 262 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 PHF21AQ96BD5 680 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 DDIT4LQ96D03 193 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 S100A16Q96FQ6 103 aaKnown RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 MED30Q96HR3 178 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 COMMD4Q9H0A8 199 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 KLK11Q9UBX7 282 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 SCP2D1Q9UJQ7 156 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 IKZF2Q9UKS7 526 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 MGAT4AQ9UM21 535 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 ING4Q9UNL4 249 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 AMDHD2Q9Y303 409 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 HDGFL3Q9Y3E1 203 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 hCG_1807616A0A1W2PRN6 198 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 SLC22A23A1A5C7 686 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 ETV2O00321 342 aaPredicted RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 XRCC3O43542 346 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 CDC14BO60729 498 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 NDUFB6O95139 128 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 VENTXO95231 258 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 IL5P05113 134 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 CECR9P0C854 216 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 CTLA4P16410 223 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 IGFBP3P17936 291 aaPredicted RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 VEGFCP49767 419 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 SLC35A1P78382 337 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 MFGE8Q08431 387 aaPredicted RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 ADIPOQQ15848 244 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 PCK2Q16822 640 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 METTL11BQ5VVY1 283 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 GLDNQ6ZMI3 551 aaPredicted RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 CATSPERDQ86XM0 798 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF679Q8IYX0 411 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 SPICQ8N5J4 248 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF431Q8TF32 576 aaPredicted RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 NPIPB3Q92617 1050 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 MARS2Q96GW9 593 aaKnown RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 DUX5Q96PT3 197 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 PLK3Q9H4B4 646 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 ELOVL3Q9HB03 270 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 HIF1ANQ9NWT6 349 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 B3GNT2Q9NY97 397 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 MRPL15Q9P015 296 aaKnown RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF222Q9UK12 451 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 FLVCR2Q9UPI3 526 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 IGKV3D-15A0A087WSY6 115 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 C17orf100A8MU93 164 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 C11orf98E9PRG8 122 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 SLC17A2O00624 439 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 XKRYO14609 159 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 LDLRAD4O15165 306 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 PPIHO43447 177 aaKnown RBP4.1□□□□□ -1.75
LINC00550-201ENST00000629293 KCNAB3O43448 404 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 EIF1BO60739 113 aaKnown RBP4.1□□□□□ -1.75
LINC00550-201ENST00000629293 PNPP00491 289 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 ALDOBP05062 364 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 CD79AP11912 226 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 PTHLHP12272 177 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 DCTDP32321 178 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 THBS4P35443 961 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 ZP4Q12836 540 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 MEP1BQ16820 701 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 SLC18B1Q6NT16 456 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 SSX8Q7RTT4 187 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF676Q8N7Q3 588 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 BEST4Q8NFU0 473 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 OR9K2Q8NGE7 335 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 ABHD5Q8WTS1 349 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 THEM6Q8WUY1 208 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 SLC25A28Q96A46 364 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF436Q9C0F3 470 aaPredicted RBP4.1□□□□□ -1.75
LINC00550-201ENST00000629293 PIPOXQ9P0Z9 390 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 MTFP1Q9UDX5 166 aa4.1□□□□□ -1.75
LINC00550-201ENST00000629293 RHBDD3Q9Y3P4 386 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms