RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 MICAL3Q7RTP6 2002 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 FLNCQ14315 2725 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 DOCK2Q92608 1830 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 SPAARA0A1B0GVQ0 90 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 A8MWL6 223 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.31□□□□□ -2.2
VBP1-204ENST00000625964 MPHOSPH10O00566 681 aaKnown RBP1.31□□□□□ -2.2
VBP1-204ENST00000625964 NELFEP18615 380 aaKnown RBP1.31□□□□□ -2.2
VBP1-204ENST00000625964 HLA-DMAP28067 261 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 ADORA1P30542 326 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 HOXA6P31267 233 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 OTX1P32242 354 aaPredicted RBP1.31□□□□□ -2.2
VBP1-204ENST00000625964 APLNRP35414 380 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 FABP6P51161 128 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 HTR4Q13639 388 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 ALKBH6Q3KRA9 238 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 SP6Q3SY56 376 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 ARMC12Q5T9G4 340 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 SLC26A10Q8NG04 563 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 OR10W1Q8NGF6 305 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 OR52N1Q8NH53 320 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 N4BP2L2Q92802 583 aaPredicted RBP1.31□□□□□ -2.2
VBP1-204ENST00000625964 RPEQ96AT9 228 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 DYNLL2Q96FJ2 89 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 PRRC1Q96M27 445 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 UCK2Q9BZX2 261 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 SLC7A5P2Q9GIP4 190 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 TRIM45Q9H8W5 580 aaPredicted RBP1.31□□□□□ -2.2
VBP1-204ENST00000625964 ZNF160Q9HCG1 818 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 SCN10AQ9Y5Y9 1956 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 NBEAL1Q6ZS30 2694 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 F8P00451 2351 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 COL11A1P12107 1806 aaPredicted RBP1.31□□□□□ -2.2
VBP1-204ENST00000625964 SPEF2Q9C093 1822 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 NLRC5Q86WI3 1866 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 NBPF19A0A087WUL8 3843 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 COL12A1Q99715 3063 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 CENPEQ02224 2701 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 NF1P21359 2839 aa1.31□□□□□ -2.2
VBP1-204ENST00000625964 SLC16A7O60669 478 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 CCNB2O95067 398 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 IGLV2-8P01709 118 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 MAS1P04201 325 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 PSMD8P48556 350 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 DYNLL1P63167 89 aaKnown RBP1.3□□□□□ -2.2
VBP1-204ENST00000625964 HSDL1Q3SXM5 330 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 FAM43BQ6ZT52 329 aaPredicted RBP1.3□□□□□ -2.2
VBP1-204ENST00000625964 ORMDL3Q8N138 153 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 SLC25A29Q8N8R3 303 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 STACQ99469 402 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 PLIN2Q99541 437 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 TEAD3Q99594 435 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 LYARQ9NX58 379 aaKnown RBP1.3□□□□□ -2.2
VBP1-204ENST00000625964 PTTG3PQ9NZH4 202 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 HMGXB4Q9UGU5 601 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 SAMHD1Q9Y3Z3 626 aaKnown RBP1.3□□□□□ -2.2
VBP1-204ENST00000625964 CACNA1DQ01668 2161 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 GOLGA4Q13439 2230 aaKnown RBP1.3□□□□□ -2.2
VBP1-204ENST00000625964 ASCC3Q8N3C0 2202 aaKnown RBP1.3□□□□□ -2.2
VBP1-204ENST00000625964 FREM2Q5SZK8 3169 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 NBASA2RRP1 2371 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 FN1P02751 2386 aaKnown RBP1.3□□□□□ -2.2
VBP1-204ENST00000625964 MYH3P11055 1940 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 TICRRQ7Z2Z1 1910 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 ZNF407Q9C0G0 2248 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 ICE1Q9Y2F5 2266 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 WDFY3Q8IZQ1 3526 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 ISPDA4D126 451 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 GOLGA6L4A6NEF3 574 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 ANKRD65E5RJM6 399 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 SLC19A2O60779 497 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 CIAO1O76071 339 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 CD160O95971 181 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 CLTAP09496 248 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 CTRB1P17538 263 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 MPIP34949 423 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 MYCNOSP40205 109 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 RFC3P40938 356 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 UQCRFS1P47985 274 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 TGM4P49221 684 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 ACOT2P49753 483 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 RGS8P57771 180 aaPredicted RBP1.3□□□□□ -2.2
VBP1-204ENST00000625964 C6orf99Q4VX62 202 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 CARD17Q5XLA6 110 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 LRRC66Q68CR7 880 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 CLEC18BQ6UXF7 455 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 CENPQQ7L2Z9 268 aaPredicted RBP1.3□□□□□ -2.2
VBP1-204ENST00000625964 BBS7Q8IWZ6 715 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 CDH26Q8IXH8 852 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 OR4C5Q8NGB2 326 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 OR4M2Q8NGB6 313 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 CMTM2Q8TAZ6 248 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 PLEKHF2Q9H8W4 249 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 PARP11Q9NR21 331 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 HEBP1Q9NRV9 189 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 RBFOX1Q9NWB1 397 aaKnown RBP1.3□□□□□ -2.2
VBP1-204ENST00000625964 NDRG2Q9UN36 371 aaKnown RBP1.3□□□□□ -2.2
VBP1-204ENST00000625964 MYH2Q9UKX2 1941 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 CLUHO75153 1309 aa1.3□□□□□ -2.2
VBP1-204ENST00000625964 NRCAMQ92823 1304 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms