RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 LINC00527Q9UJ94 153 aa11.63□□□□□ -0.55
PNKP-218ENST00000625299 MOB4Q9Y3A3 225 aa11.63□□□□□ -0.55
PNKP-218ENST00000625299 LSM4Q9Y4Z0 139 aaKnown RBP11.63□□□□□ -0.55
PNKP-218ENST00000625299 HSPE1-MOB4S4R3N1 261 aa11.63□□□□□ -0.55
PNKP-218ENST00000625299 V9GYS6 101 aa11.63□□□□□ -0.55
PNKP-218ENST00000625299 KIAA2026Q5HYC2 2103 aa11.63□□□□□ -0.55
PNKP-218ENST00000625299 DNAH7Q8WXX0 4024 aa11.63□□□□□ -0.55
PNKP-218ENST00000625299 ARRDC5A6NEK1 342 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 LOC110117498-PIK3R3F6TDL0 507 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 H3BSH0 61 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 TOR1AO14656 332 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 ZFPL1O95159 310 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 SNRNP70P08621 437 aaKnown RBP11.62□□□□□ -0.55
PNKP-218ENST00000625299 DUSP1P28562 367 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 MNDAP41218 407 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 ECI1P42126 302 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 BDH1Q02338 343 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 CD300LDQ6UXZ3 194 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 PLEKHG7Q6ZR37 379 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 OR14K1Q8NGZ2 314 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 P2RX4Q99571 388 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 COPS3Q9UNS2 423 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 SLC7A11Q9UPY5 501 aa11.62□□□□□ -0.55
PNKP-218ENST00000625299 SERPINE3A8MV23 424 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 MAGEB4O15481 346 aaPredicted RBP11.61□□□□□ -0.55
PNKP-218ENST00000625299 PSPNO60542 156 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 ZNF254O75437 659 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 HMGN1P05114 100 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 CALCBP10092 127 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 SLC2A5P22732 501 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 CDK2P24941 298 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 CEACAM3P40198 252 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 P2RX3P56373 397 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 ODF4Q2M2E3 257 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 TPTE2P1Q5T6R2 138 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 OR52W1Q6IF63 320 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 SLC25A26Q70HW3 274 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 RTN4RL2Q86UN3 420 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 ZNF695Q8IW36 515 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 Q8NFD4 153 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 GIPC3Q8TF64 312 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 CHPT1Q8WUD6 406 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 ELAC2Q9BQ52 826 aaKnown RBP11.61□□□□□ -0.55
PNKP-218ENST00000625299 GAL3ST2Q9H3Q3 398 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 MOB1AQ9H8S9 216 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 PLEKHA1Q9HB21 404 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 ZNF286AQ9HBT8 521 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 ZFP57Q9NU63 452 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 DNAJB9Q9UBS3 223 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 HHLA2Q9UM44 414 aa11.61□□□□□ -0.55
PNKP-218ENST00000625299 UBE2J1Q9Y385 318 aaPredicted RBP11.61□□□□□ -0.55
PNKP-218ENST00000625299 IGKV1-27A0A075B6S5 117 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 TRGV10A0A0A0MS01 117 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 MGST3O14880 152 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 SLC6A1P30531 599 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 GDNFP39905 211 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 SLC35B1P78383 322 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 ROM1Q03395 351 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 HES1Q14469 280 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 HLA-DRB5Q30154 266 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 DEFB136Q30KP8 78 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 DEFB107AQ8IZN7 70 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 ASB17Q8WXJ9 295 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 RAX2Q96IS3 184 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 APOL4Q9BPW4 351 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 MAGIXQ9H6Y5 334 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 RBFOX1Q9NWB1 397 aaKnown RBP11.6□□□□□ -0.55
PNKP-218ENST00000625299 ACTR3BQ9P1U1 418 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 GLS2Q9UI32 602 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 OR52A1Q9UKL2 312 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 R4GMQ9 66 aa11.6□□□□□ -0.55
PNKP-218ENST00000625299 A0A1B0GTI1 187 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 TCRBV5S2A0A599 114 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 BUB1B-PAK6H3BSN5 160 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 CCL24O00175 119 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 SIRPB1O00241 398 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 IGLV1-47P01700 117 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 FAM106CPP0CH98 169 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 OR3A1P47881 315 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 GP2P55259 537 aaKnown RBP11.59□□□□□ -0.55
PNKP-218ENST00000625299 ZNF91Q05481 1191 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 DOC2BQ14184 412 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 KPNB1Q14974 876 aaKnown RBP11.59□□□□□ -0.55
PNKP-218ENST00000625299 FAM98BQ52LJ0 330 aaKnown RBP11.59□□□□□ -0.55
PNKP-218ENST00000625299 C9orf66Q5T8R8 295 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 TMEM236Q5W0B7 351 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 CCDC144NLQ6NUI1 221 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 C16orf89Q6UX73 402 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 HEPN1Q6WQI6 88 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 ELMOD2Q8IZ81 293 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 CREB3L1Q96BA8 519 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 FAM107BQ9H098 131 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 PALMDQ9NP74 551 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 ING3Q9NXR8 418 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 TMEM14AQ9Y6G1 99 aa11.59□□□□□ -0.55
PNKP-218ENST00000625299 CCDC182A6NF36 153 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 SRSF10O75494 262 aaKnown RBP11.58□□□□□ -0.56
PNKP-218ENST00000625299 LY86O95711 162 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 PRKACAP17612 351 aa11.58□□□□□ -0.56
PNKP-218ENST00000625299 NPBWR2P48146 333 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms