RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 ARG1P05089 322 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 GABRR1P24046 479 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 NHLH2Q02577 135 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 RNPS1Q15287 305 aaKnown RBP11.33□□□□□ -0.6
SKP2-209ENST00000620197 TMEM176BQ3YBM2 270 aaPredicted RBP11.33□□□□□ -0.6
SKP2-209ENST00000620197 FBXL14Q8N1E6 418 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 PLPPR1Q8TBJ4 325 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 INTS12Q96CB8 462 aaKnown RBP11.33□□□□□ -0.6
SKP2-209ENST00000620197 ABHD14BQ96IU4 210 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 C20orf24Q9BUV8 137 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 METTL9Q9H1A3 318 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 METTL7AQ9H8H3 244 aa11.33□□□□□ -0.6
SKP2-209ENST00000620197 BORCS7-ASMTA0A0B4J1R7 106 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 PITX3O75364 302 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 PNLIPP16233 465 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 ZNF14P17017 642 aaPredicted RBP11.32□□□□□ -0.6
SKP2-209ENST00000620197 PPP1CCP36873 323 aaKnown RBP11.32□□□□□ -0.6
SKP2-209ENST00000620197 CLINT1Q14677 625 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 RAB30Q15771 203 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 SP6Q3SY56 376 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 DNASE2BQ8WZ79 361 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 PAPOLGQ9BWT3 736 aaKnown RBP11.32□□□□□ -0.6
SKP2-209ENST00000620197 TMED3Q9Y3Q3 217 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 A0A1W2PPE2 198 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 TXNL1O43396 289 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 ZIC3O60481 467 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 CEACAM1P13688 526 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 RSPO4Q2I0M5 234 aaPredicted RBP11.32□□□□□ -0.6
SKP2-209ENST00000620197 KRBOX4Q5JUW0 171 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 SLC22A8Q8TCC7 542 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 TP53RKQ96S44 253 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 GGACTQ9BVM4 153 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 RGCCQ9H4X1 137 aa11.32□□□□□ -0.6
SKP2-209ENST00000620197 HSD17B6O14756 317 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 DHHO43323 396 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 CDS2O95674 445 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 MYF5P13349 255 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 RND3P61587 244 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 EWSR1Q01844 656 aaKnown RBP eCLIP11.31□□□□□ -0.6
SKP2-209ENST00000620197 RAB35Q15286 201 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 GALNTL5Q7Z4T8 443 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 TMEM171Q8WVE6 324 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 ZNF837Q96EG3 531 aaPredicted RBP11.31□□□□□ -0.6
SKP2-209ENST00000620197 KCNIP3Q9Y2W7 256 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 UNC13CQ8NB66 2214 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.31□□□□□ -0.6
SKP2-209ENST00000620197 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.31□□□□□ -0.6
SKP2-209ENST00000620197 TLX3O43711 291 aaPredicted RBP11.31□□□□□ -0.6
SKP2-209ENST00000620197 VAMP5O95183 116 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 NTF4P34130 210 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 OR2B8PP59922 312 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 FAM69BQ5VUD6 431 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 GPR137CQ8N3F9 429 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 TMPRSS5Q9H3S3 457 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 URB1O60287 2271 aaKnown RBP11.31□□□□□ -0.6
SKP2-209ENST00000620197 ZNF732B4DXR9 585 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 F5H5K5 113 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 DIRAS3O95661 229 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 CCL20P78556 96 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 PCOLCEQ15113 449 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 TSPO2Q5TGU0 170 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 CDPF1Q6NVV7 123 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 LHFPL2Q6ZUX7 228 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 LGI3Q8N145 548 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 SLC35G3Q8N808 338 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 GPR173Q9NS66 373 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 DMRT1Q9Y5R6 373 aa11.31□□□□□ -0.6
SKP2-209ENST00000620197 IGSF23A1L1A6 192 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 ZNF729A6NN14 1252 aaPredicted RBP11.3□□□□□ -0.6
SKP2-209ENST00000620197 PHOX2AO14813 284 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 ST8SIA3O43173 380 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 HOXA5P20719 270 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 SFTPDP35247 375 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 MTCP1P56278 107 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 NCMAPQ5T1S8 102 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 TMEM211Q6ICI0 200 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 ADAM5Q6NVV9 412 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 OR11L1Q8NGX0 322 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 SIGLEC12Q96PQ1 595 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 RARRES2Q99969 163 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 TMEM222Q9H0R3 208 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 hCG_38984A0A1B0GV85 526 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 TRDCB7Z8K6 153 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 GEMIN2O14893 280 aaKnown RBP11.3□□□□□ -0.6
SKP2-209ENST00000620197 XRCC2O43543 280 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 SPRY1O43609 319 aaPredicted RBP11.3□□□□□ -0.6
SKP2-209ENST00000620197 CST2P09228 141 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 LIFP15018 202 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 CAMLGP49069 296 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 PYY3Q5JQD4 70 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 DBX2Q6ZNG2 339 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 DYRK2Q92630 601 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 SPTSSAQ969W0 71 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 SPSB4Q96A44 273 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 PBDC1Q9BVG4 233 aa11.3□□□□□ -0.6
SKP2-209ENST00000620197 LYRM2Q9NU23 88 aaPredicted RBP11.3□□□□□ -0.6
SKP2-209ENST00000620197 PROB1E7EW31 1015 aa11.29□□□□□ -0.6
SKP2-209ENST00000620197 ANGPTL7O43827 346 aa11.29□□□□□ -0.6
SKP2-209ENST00000620197 B3GALT5-AS1P59052 145 aa11.29□□□□□ -0.6
SKP2-209ENST00000620197 TAF9Q16594 264 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms