RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 CHRM2P08172 466 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 OCM2P0CE71 109 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 BCL3P20749 454 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 FPR2P25090 351 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 GABRA2P47869 451 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 SOX2P48431 317 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 CEBPDP49716 269 aaPredicted RBP6.78□□□□□ -1.32
NEK3-209ENST00000618856 GP2P55259 537 aaKnown RBP6.78□□□□□ -1.32
NEK3-209ENST00000618856 DLX6P56179 175 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 TPBGQ13641 420 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 SPHARQ15513 63 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 KRTAP24-1Q3LI83 254 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 ARMCX4Q5H9R4 360 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 METTL11BQ5VVY1 283 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 Q6P435 159 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 PRSS48Q7RTY5 328 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 BCL6BQ8N143 479 aaPredicted RBP6.78□□□□□ -1.32
NEK3-209ENST00000618856 FAM58AQ8N1B3 248 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 MS4A15Q8N5U1 240 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 ZFP41Q8N8Y5 198 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 ZDHHC22Q8N966 263 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 OR52N4Q8NGI2 321 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 OR51T1Q8NGJ9 327 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 OR13C5Q8NGS8 318 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 TSEN15Q8WW01 171 aaKnown RBP6.78□□□□□ -1.32
NEK3-209ENST00000618856 C1orf147Q96MC9 270 aaPredicted RBP6.78□□□□□ -1.32
NEK3-209ENST00000618856 ZNF48Q96MX3 618 aaPredicted RBP6.78□□□□□ -1.32
NEK3-209ENST00000618856 DERL3Q96Q80 235 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 SPACA5Q96QH8 159 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 ZNF184Q99676 751 aaPredicted RBP6.78□□□□□ -1.32
NEK3-209ENST00000618856 SLC6A7Q99884 636 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 SUCNR1Q9BXA5 334 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 TMEM138Q9NPI0 162 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 ESM1Q9NQ30 184 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 C19orf12Q9NSK7 152 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 IL36GQ9NZH8 169 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 IL36RNQ9UBH0 155 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 FOXJ3Q9UPW0 622 aa6.78□□□□□ -1.32
NEK3-209ENST00000618856 RRP15Q9Y3B9 282 aaKnown RBP6.78□□□□□ -1.32
NEK3-209ENST00000618856 TRAV8-7A0A075B6U6 113 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 IGHV1-69DA0A0B4J2H0 117 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 CLDN34H7C241 214 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 RGS10O43665 173 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 ANGPTL7O43827 346 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 PSPNO60542 156 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 HAND1O96004 215 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 CYB5AP00167 134 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 IGHV1-69P01742 117 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 CELP19835 753 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 PRTN3P24158 256 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 ERP29P30040 261 aaKnown RBP6.77□□□□□ -1.33
NEK3-209ENST00000618856 BDKRB2P30411 391 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 MTNR1BP49286 362 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 GABARAPL2P60520 117 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 ARF6P62330 175 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 PAX5Q02548 391 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 COL10A1Q03692 680 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 NHLRC3Q5JS37 347 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 TMEM200BQ69YZ2 307 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 HCP5Q6MZN7 132 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 TCF23Q7RTU1 214 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 OR8H2Q8N162 312 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 BATF2Q8N1L9 274 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 SPATA3Q8NHX4 192 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 TBC1D15Q8TC07 691 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 ZNF418Q8TF45 676 aaPredicted RBP6.77□□□□□ -1.33
NEK3-209ENST00000618856 TMEM158Q8WZ71 300 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 THRSPQ92748 146 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 EMG1Q92979 244 aaKnown RBP6.77□□□□□ -1.33
NEK3-209ENST00000618856 RFT1Q96AA3 541 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 CPNE2Q96FN4 548 aaPredicted RBP6.77□□□□□ -1.33
NEK3-209ENST00000618856 SNX22Q96L94 193 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 OR14A2Q96R54 314 aa6.77□□□□□ -1.33
NEK3-209ENST00000618856 ELL3Q9HB65 397 aaPredicted RBP6.77□□□□□ -1.33
NEK3-209ENST00000618856 SF3B6Q9Y3B4 125 aaKnown RBP6.77□□□□□ -1.33
NEK3-209ENST00000618856 SOX21Q9Y651 276 aaPredicted RBP6.77□□□□□ -1.33
NEK3-209ENST00000618856 TRAV40A0A0B4J280 105 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 A0A0G2JK05 382 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 MAGEA13PA6NCF6 341 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 C17orf98A8MV24 154 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 RNASEK-C17orf49H0YIS7 233 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 RBP4P02753 201 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 CSN2P05814 226 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 HCKP08631 526 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 CPEP16870 476 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 NDUFB7P17568 137 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 ZNF93P35789 620 aaPredicted RBP6.76□□□□□ -1.33
NEK3-209ENST00000618856 TGFBR2P37173 567 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 PTGFRP43088 359 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 OR3A1P47881 315 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 POU3F4P49335 361 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 BMXP51813 675 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 MEF2CQ06413 473 aaPredicted RBP6.76□□□□□ -1.33
NEK3-209ENST00000618856 MLLT11Q13015 90 aaPredicted RBP6.76□□□□□ -1.33
NEK3-209ENST00000618856 TBCEQ15813 527 aaPredicted RBP6.76□□□□□ -1.33
NEK3-209ENST00000618856 VMO1Q7Z5L0 202 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 PHC2Q8IXK0 858 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 CMTM4Q8IZR5 234 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 CHST4Q8NCG5 386 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 TMEM185AQ8NFB2 350 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms