RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 ZNF688P0C7X2 276 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 ZNF35P13682 527 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 PRSS3P35030 304 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 RPA3P35244 121 aaPredicted RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 PCK1P35558 622 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 COILP38432 576 aaPredicted RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 OPRK1P41145 380 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 EIF1P41567 113 aaKnown RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 GCLMP48507 274 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 MNAT1P51948 309 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 RHOAP61586 193 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 PPP1CAP62136 330 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 DYNLL1P63167 89 aaKnown RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 PRDX1Q06830 199 aaKnown RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 BAXQ07812 192 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 TMEM249Q2WGJ8 235 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 FBXL19-AS1Q494R0 122 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 ZNF404Q494X3 552 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 Q499Y3 187 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 LUZP6Q538Z0 58 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 TEX30Q5JUR7 227 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 CDKL4Q5MAI5 379 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 NIPAL1Q6NVV3 410 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 ZFP1Q6P2D0 407 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 GUSBP11Q6P575 273 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 UGT2A3Q6UWM9 527 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 TPGS1Q6ZTW0 290 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 SSX7Q7RTT5 188 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 PDPNQ86YL7 162 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 C10orf107Q8IVU9 208 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 CYP4Z2PQ8N1L4 340 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 RIBC1Q8N443 379 aaPredicted RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 RNF182Q8N6D2 247 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 ATP6V1C2Q8NEY4 427 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 OR2K2Q8NGT1 345 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 SYNPRQ8TBG9 265 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 DYNC2LI1Q8TCX1 351 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 RILPQ96NA2 401 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 BIRC8Q96P09 236 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 LINC01587Q99440 93 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 MARVELD1Q9BSK0 173 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 NDFIP1Q9BT67 221 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 MRPL20Q9BYC9 149 aaKnown RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 ZNF436Q9C0F3 470 aaPredicted RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 HDHD2Q9H0R4 259 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 DSN1Q9H410 356 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 DHX35Q9H5Z1 703 aaKnown RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 ZNF430Q9H8G1 570 aaPredicted RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 FBXO6Q9NRD1 293 aaPredicted RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 TAS2R5Q9NYW4 299 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 PRO0628Q9UI54 55 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 ZNF706Q9Y5V0 76 aaPredicted RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 TMEM14AQ9Y6G1 99 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 GPR179Q6PRD1 2367 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 RAD50Q92878 1312 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 A0A0G2JMP0 313 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 A0A0X1KG70 313 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 TMEM72A0PK05 275 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 TMEM213A2RRL7 107 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 GOLGA6L10A6NI86 522 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 OR2AT4A6NND4 320 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 C9J4A7 227 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 UPK1AO00322 258 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 TCAPO15273 167 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 RBFOX2O43251 390 aaKnown RBP eCLIP1.34□□□□□ -2.19
TARDBP-220ENST00000618606 FGF16O43320 207 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 ATP8B1O43520 1251 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 PLIN3O60664 434 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 E2F6O75461 281 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 GATBO75879 557 aaKnown RBP1.34□□□□□ -2.19
TARDBP-220ENST00000618606 OR2A4O95047 310 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 KLHL2O95198 593 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 ATP6V1G2O95670 118 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 HLA-DQA1P01909 254 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 LINC00869P0C866 280 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 OCMP0CE72 109 aaPredicted RBP1.34□□□□□ -2.19
TARDBP-220ENST00000618606 HLA-DMAP28067 261 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 CXCL12P48061 93 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 TTPAP49638 278 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 RPL14P50914 215 aaKnown RBP1.34□□□□□ -2.19
TARDBP-220ENST00000618606 SLC18A1P54219 525 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 TAS2R43P59537 309 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 KRTAP12-3P60328 96 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 RAB8AP61006 207 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 MEF2CQ06413 473 aaPredicted RBP1.34□□□□□ -2.19
TARDBP-220ENST00000618606 ITGB3BPQ13352 177 aaPredicted RBP1.34□□□□□ -2.19
TARDBP-220ENST00000618606 TMEM241Q24JQ0 296 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 YIF1BQ5BJH7 314 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 Q5W150 140 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 KCTD16Q68DU8 428 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 MED27Q6P2C8 311 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 CLEC18BQ6UXF7 455 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 FAM151BQ6UXP7 276 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 CASP12Q6UXS9 341 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 PLEKHG7Q6ZR37 379 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 GALNT10Q86SR1 603 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 ZNF695Q8IW36 515 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 ITPRIPQ8IWB1 547 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 ZNF101Q8IZC7 436 aa1.34□□□□□ -2.19
TARDBP-220ENST00000618606 SLC25A29Q8N8R3 303 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms