RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 IGHV5-10-1A0A0J9YXX1 117 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 A0A1W2PPE2 198 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 CCDC85CA6NKD9 419 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 LINC00587B1AMM8 73 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 PHF1O43189 567 aaPredicted RBP17.69■□□□□ 0.42
NEK3-208ENST00000618534 VAMP5O95183 116 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 S100A9P06702 114 aaKnown RBP17.69■□□□□ 0.42
NEK3-208ENST00000618534 RBP2P50120 134 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 SULT1A1P50225 295 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 CCL7P80098 99 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 MRPS34P82930 218 aaKnown RBP17.69■□□□□ 0.42
NEK3-208ENST00000618534 PDCD1Q15116 288 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 FBXL14Q8N1E6 418 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 JSRP1Q96MG2 331 aaPredicted RBP17.69■□□□□ 0.42
NEK3-208ENST00000618534 TNFSF11O14788 317 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 SYNGR3O43761 229 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 OR13C7P0DN81 318 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 RAB5CP51148 216 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 PCOLCEQ15113 449 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 RAB35Q15286 201 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 Q6ZPA2 131 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 FAM213BQ8TBF2 198 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 DNASE2BQ8WZ79 361 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 MOB3AQ96BX8 217 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 SLC35B3Q9H1N7 401 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 ZIC3O60481 467 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 LCATP04180 440 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 LIFP15018 202 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 ASCL4Q6XD76 172 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 MEX3BQ6ZN04 569 aaKnown RBP17.68■□□□□ 0.42
NEK3-208ENST00000618534 SLC35G3Q8N808 338 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 CCDC74BQ96LY2 380 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 TP53RKQ96S44 253 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 RSRP1Q9BUV0 290 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 SRXN1Q9BYN0 137 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 SEBOXQ9HB31 216 aaPredicted RBP17.68■□□□□ 0.42
NEK3-208ENST00000618534 ZNF286AQ9HBT8 521 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 KCNJ16Q9NPI9 418 aa17.68■□□□□ 0.42
NEK3-208ENST00000618534 A0A0J9YW62 118 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 ONECUT2O95948 504 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 PATE4P0C8F1 98 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 PMELP40967 661 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 LHFPL2Q6ZUX7 228 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 OSR2Q8N2R0 312 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 SLC39A7Q92504 469 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 ZNF251Q9BRH9 671 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 BCO1Q9HAY6 547 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 PROK2Q9HC23 129 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 METTL1Q9UBP6 276 aaKnown RBP17.67■□□□□ 0.42
NEK3-208ENST00000618534 DKKL1Q9UK85 242 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 RFNGQ9Y644 331 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 K7N7A8 449 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 FABP1P07148 127 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 AADACP22760 399 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 EWSR1Q01844 656 aaKnown RBP eCLIP17.67■□□□□ 0.42
NEK3-208ENST00000618534 COL19A1Q14993 1142 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 RHEBQ15382 184 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 MRPL14Q6P1L8 145 aaKnown RBP17.67■□□□□ 0.42
NEK3-208ENST00000618534 OR4D5Q8NGN0 318 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 OR1J1Q8NGS3 322 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 SYT3Q9BQG1 590 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 PBDC1Q9BVG4 233 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 ST3GAL6Q9Y274 331 aa17.67■□□□□ 0.42
NEK3-208ENST00000618534 GDF9O60383 454 aa17.66■□□□□ 0.42
NEK3-208ENST00000618534 NRASP01111 189 aa17.66■□□□□ 0.42
NEK3-208ENST00000618534 OR2B8PP59922 312 aa17.66■□□□□ 0.42
NEK3-208ENST00000618534 ADAM5Q6NVV9 412 aa17.66■□□□□ 0.42
NEK3-208ENST00000618534 OR1F12Q8NHA8 337 aa17.66■□□□□ 0.42
NEK3-208ENST00000618534 AKR7LQ8NHP1 331 aa17.66■□□□□ 0.42
NEK3-208ENST00000618534 BOD1Q96IK1 185 aa17.66■□□□□ 0.42
NEK3-208ENST00000618534 IGHV2-5P01817 119 aa17.66■□□□□ 0.42
NEK3-208ENST00000618534 DSCR4P56555 118 aaPredicted RBP17.66■□□□□ 0.42
NEK3-208ENST00000618534 INTS12Q96CB8 462 aaKnown RBP17.66■□□□□ 0.42
NEK3-208ENST00000618534 NIT2Q9NQR4 276 aa17.66■□□□□ 0.42
NEK3-208ENST00000618534 GSN-AS1Q9NRJ2 163 aa17.66■□□□□ 0.42
NEK3-208ENST00000618534 KIAA1549Q9HCM3 1950 aa17.65■□□□□ 0.42
NEK3-208ENST00000618534 OR8U8P0C7N1 319 aa17.65■□□□□ 0.42
NEK3-208ENST00000618534 NQO2P16083 231 aa17.65■□□□□ 0.42
NEK3-208ENST00000618534 HERV-K104P61576 105 aa17.65■□□□□ 0.42
NEK3-208ENST00000618534 CLINT1Q14677 625 aa17.65■□□□□ 0.42
NEK3-208ENST00000618534 GPR137CQ8N3F9 429 aa17.65■□□□□ 0.42
NEK3-208ENST00000618534 TCEAL3Q969E4 200 aa17.65■□□□□ 0.42
NEK3-208ENST00000618534 RARRES2Q99969 163 aa17.65■□□□□ 0.42
NEK3-208ENST00000618534 CRLF2Q9HC73 371 aa17.65■□□□□ 0.42
NEK3-208ENST00000618534 SDK2Q58EX2 2172 aa17.65■□□□□ 0.42
NEK3-208ENST00000618534 FAM24AA6NFZ4 105 aa17.64■□□□□ 0.42
NEK3-208ENST00000618534 UCP3P55916 312 aa17.64■□□□□ 0.42
NEK3-208ENST00000618534 GNMTQ14749 295 aa17.64■□□□□ 0.42
NEK3-208ENST00000618534 BATF2Q8N1L9 274 aa17.64■□□□□ 0.42
NEK3-208ENST00000618534 CCDC71LQ8N9Z2 235 aa17.64■□□□□ 0.42
NEK3-208ENST00000618534 OCIAD1Q9NX40 245 aa17.64■□□□□ 0.42
NEK3-208ENST00000618534 TMED3Q9Y3Q3 217 aa17.64■□□□□ 0.42
NEK3-208ENST00000618534 LY6G6EA0A0G2JKS1 128 aa17.64■□□□□ 0.41
NEK3-208ENST00000618534 NKX2-6A6NCS4 301 aa17.64■□□□□ 0.41
NEK3-208ENST00000618534 GPR37O15354 613 aa17.64■□□□□ 0.41
NEK3-208ENST00000618534 B4GALT1P15291 398 aa17.64■□□□□ 0.41
NEK3-208ENST00000618534 NTF4P34130 210 aa17.64■□□□□ 0.41
NEK3-208ENST00000618534 TMEM42Q69YG0 159 aa17.64■□□□□ 0.41
NEK3-208ENST00000618534 ZNF565Q8N9K5 539 aa17.64■□□□□ 0.41
NEK3-208ENST00000618534 SUMF1Q8NBK3 374 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms