RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CCDC167Q9P0B6 97 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 VSIG4Q9Y279 399 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 NOTCH3Q9UM47 2321 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 KRTAP4-8A0A0G2JLE6 195 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 A0A1B0GVY2 172 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 DHRS12A0PJE2 317 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 TRIM64CA6NLI5 447 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 SERPINE3A8MV23 424 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 ZNF732B4DXR9 585 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 NDUFAB1O14561 156 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 AKR7A2O43488 359 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 SPNP16150 400 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 CCL1P22362 96 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 HSD11B1P28845 292 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 MECP2P51608 486 aaKnown RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 CAPZA1P52907 286 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 TSPAN31Q12999 210 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 HDXQ7Z353 690 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 TCTEX1D1Q8N7M0 179 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 ZNF676Q8N7Q3 588 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 OR1N2Q8NGR9 330 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 NMNAT3Q96T66 252 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 NSRP1Q9H0G5 558 aaKnown RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 CST11Q9H112 138 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 OR52D1Q9H346 318 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 YY1AP1Q9H869 796 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 RPRD1BQ9NQG5 326 aaKnown RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 TPSG1Q9NRR2 321 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 CDH10Q9Y6N8 788 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 hCG_2014768A0A024R1R8 64 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 ARRDC5A6NEK1 342 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 SLC25A17O43808 307 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 ZNF254O75437 659 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 MED14OSP0DP75 135 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 FMO3P31513 532 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 ZNF137PP52743 207 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 ZNF91Q05481 1191 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 SF3A3Q12874 501 aaKnown RBP eCLIP3.54□□□□□ -1.84
SNCA-213ENST00000618500 EIF2B1Q14232 305 aaKnown RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 TAF13Q15543 124 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 HAGHQ16775 308 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 LINC01590Q5TEZ4 76 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 C8orf82Q6P1X6 216 aaPredicted RBP3.54□□□□□ -1.84
SNCA-213ENST00000618500 GDPD3Q7L5L3 318 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 TIGD4Q8IY51 512 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 ABHD12Q8N2K0 398 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 LILRB2Q8N423 598 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 LNX2Q8N448 690 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 OR9G1Q8NH87 305 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 PGAM5Q96HS1 289 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 MNTQ99583 582 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 COMMD4Q9H0A8 199 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 SLC22A13Q9Y226 551 aa3.54□□□□□ -1.84
SNCA-213ENST00000618500 TBX1O43435 398 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 ANXA2P07355 339 aaKnown RBP3.53□□□□□ -1.84
SNCA-213ENST00000618500 CGB3P0DN86 165 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 CGB7P0DN87 165 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 TNFRSF1BP20333 461 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 CD1BP29016 333 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 PPIFP30405 207 aaKnown RBP3.53□□□□□ -1.84
SNCA-213ENST00000618500 GPM6AP51674 278 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 RIPPLY1Q0D2K3 151 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 MAPRE2Q15555 327 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 CLVS2Q5SYC1 327 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 ZNF684Q5T5D7 378 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 RNLSQ5VYX0 342 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 ZNF782Q6ZMW2 699 aaPredicted RBP3.53□□□□□ -1.84
SNCA-213ENST00000618500 LCNL1Q6ZST4 164 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 MINDY2Q8NBR6 621 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 SLC37A3Q8NCC5 494 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 OR4M1Q8NGD0 313 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 RP9Q8TA86 221 aaKnown RBP3.53□□□□□ -1.84
SNCA-213ENST00000618500 RBMXL1Q96E39 390 aaKnown RBP3.53□□□□□ -1.84
SNCA-213ENST00000618500 TSSK2Q96PF2 358 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 HIPK2Q9H2X6 1198 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 ZNF286AQ9HBT8 521 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 GAR1Q9NY12 217 aaKnown RBP3.53□□□□□ -1.84
SNCA-213ENST00000618500 ZNF319Q9P2F9 582 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 TP53TG1Q9Y2A0 90 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 HILPDAQ9Y5L2 63 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 DNAH11Q96DT5 4516 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 TMEM82A0PJX8 343 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 LINC01619G3V211 115 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 MPZL2O60487 215 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 SRSF10O75494 262 aaKnown RBP3.53□□□□□ -1.84
SNCA-213ENST00000618500 SERPINA1P01009 418 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 LGALS1P09382 135 aaKnown RBP3.53□□□□□ -1.84
SNCA-213ENST00000618500 TMEM11P17152 192 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 OR1E2P47887 323 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 SLC35D3Q5M8T2 416 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 HACD2Q6Y1H2 254 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 FAM57BQ71RH2 274 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 RRM2BQ7LG56 351 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 SAXO1Q8IYX7 474 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 Q8N3U1 123 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 Q8N9W7 124 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 CHST4Q8NCG5 386 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 PROKR2Q8NFJ6 384 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 OR8B12Q8NGG6 310 aa3.53□□□□□ -1.84
SNCA-213ENST00000618500 TLCD1Q96CP7 247 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms