RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 H0YHG0 523 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 MYL12BO14950 172 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 HOXA3O43365 443 aaPredicted RBP13.11□□□□□ -0.31
BRCA1-228ENST00000618469 ZNF737O75373 536 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 HAND1O96004 215 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 IGKV1D-12P01611 117 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 GUCA2AQ02747 115 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 SLC9A3R2Q15599 337 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 METAP1DQ6UB28 335 aaPredicted RBP13.11□□□□□ -0.31
BRCA1-228ENST00000618469 FAM58AQ8N1B3 248 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 OR13C5Q8NGS8 318 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 SLC25A28Q96A46 364 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 FAM234AQ9H0X4 552 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 METTL8Q9H825 291 aaKnown RBP13.11□□□□□ -0.31
BRCA1-228ENST00000618469 TAS2R4Q9NYW5 299 aa13.11□□□□□ -0.31
BRCA1-228ENST00000618469 A0A0U1RQK1 487 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 PNMA8CA0A1B0GUJ8 204 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 A0A1W2PRD5 423 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 A0A1W2PRF3 423 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 A0A1W2PRM7 423 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 RNASEK-C17orf49H0YIS7 233 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 K7N7A8 449 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 RNASE1P07998 156 aaKnown RBP13.1□□□□□ -0.31
BRCA1-228ENST00000618469 CHRM2P08172 466 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 RAB3AP20336 220 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 DUSP1P28562 367 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 EDDM3BP56851 147 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 EDDM3AQ14507 147 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 ZNF273Q14593 569 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 KISS1Q15726 138 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 MIDNQ504T8 468 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 SPIN3Q5JUX0 258 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 PRR31Q5SQ13 230 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 NCR3LG1Q68D85 454 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 ASPHD2Q6ICH7 369 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 CRIP3Q6Q6R5 217 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 OR51A2Q8NGJ7 313 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 TMEM106AQ96A25 262 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 TNFRSF19Q9NS68 423 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 PLCXD1Q9NUJ7 323 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 ZNF281Q9Y2X9 895 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 TRRAPQ9Y4A5 3859 aa13.1□□□□□ -0.31
BRCA1-228ENST00000618469 A0A1W2PPH5 198 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 TMEM82A0PJX8 343 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 CLDN34H7C241 214 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 OGG1O15527 345 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 KDM4BO94953 1096 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 ALX3O95076 343 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 MELTFP08582 738 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 CCL3L1P16619 93 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 GABRR1P24046 479 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 EEF1B2P24534 225 aaKnown RBP13.09□□□□□ -0.31
BRCA1-228ENST00000618469 C21orf33P30042 268 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-228ENST00000618469 ZP1P60852 638 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 DMKNQ6E0U4 476 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-228ENST00000618469 GDPD3Q7L5L3 318 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 OR8H2Q8N162 312 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 PNKDQ8N490 385 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 ZNF485Q8NCK3 441 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 TNFRSF14Q92956 283 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 CPNE2Q96FN4 548 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-228ENST00000618469 GPER1Q99527 375 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 FAM192AQ9GZU8 254 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 CHST6Q9GZX3 395 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 VCX3BQ9H321 246 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 HMG20AQ9NP66 347 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 NOX4Q9NPH5 578 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 GSTK1Q9Y2Q3 226 aa13.09□□□□□ -0.31
BRCA1-228ENST00000618469 MEX3AA1L020 520 aaKnown RBP13.08□□□□□ -0.32
BRCA1-228ENST00000618469 H0YJX3 145 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 SIRPB1O00241 398 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 NPFFO15130 113 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 MAGEB3O15480 346 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 TMEM225BP0DP42 221 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 WNT4P56705 351 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 TAS2R43P59537 309 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 PPP3R1P63098 170 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 ZNF146Q15072 292 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 GRK1Q15835 563 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 TMEM200BQ69YZ2 307 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 ZNF529Q6P280 563 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 Q6YL49 198 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 C17orf107Q6ZR85 190 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 C1orf122Q6ZSJ8 110 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 SATL1Q86VE3 508 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 SAXO1Q8IYX7 474 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 OR5D13Q8NGL4 314 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 GHSRQ92847 366 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 SNX22Q96L94 193 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 PGLYRP3Q96LB9 341 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 NKX3-1Q99801 234 aaPredicted RBP13.08□□□□□ -0.32
BRCA1-228ENST00000618469 PRDM13Q9H4Q3 707 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 UNKLQ9H9P5 680 aaKnown RBP13.08□□□□□ -0.32
BRCA1-228ENST00000618469 EXOSC4Q9NPD3 245 aaKnown RBP13.08□□□□□ -0.32
BRCA1-228ENST00000618469 FKBP14Q9NWM8 211 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 GLS2Q9UI32 602 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 PCDHGB5Q9Y5G0 923 aa13.08□□□□□ -0.32
BRCA1-228ENST00000618469 GABRPO00591 440 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 PSPNO60542 156 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms