RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 LINC00596Q86U02 117 aa14.3□□□□□ -0.12
SBDS-205ENST00000617799 CLVS1Q8IUQ0 354 aaPredicted RBP14.3□□□□□ -0.12
SBDS-205ENST00000617799 OR4M2Q8NGB6 313 aa14.3□□□□□ -0.12
SBDS-205ENST00000617799 ANGPTL6Q8NI99 470 aa14.3□□□□□ -0.12
SBDS-205ENST00000617799 ST8SIA4Q92187 359 aa14.3□□□□□ -0.12
SBDS-205ENST00000617799 EMG1Q92979 244 aaKnown RBP14.3□□□□□ -0.12
SBDS-205ENST00000617799 FAHD2AQ96GK7 314 aa14.3□□□□□ -0.12
SBDS-205ENST00000617799 CENPOQ9BU64 300 aa14.3□□□□□ -0.12
SBDS-205ENST00000617799 OR14J1Q9UGF5 321 aa14.3□□□□□ -0.12
SBDS-205ENST00000617799 CSPG4Q6UVK1 2322 aa14.3□□□□□ -0.12
SBDS-205ENST00000617799 ZANQ9Y493 2812 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 A8MXK9 166 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 AIPO00170 330 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 DVL1O14640 695 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 NDUFB3O43676 98 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 PSG2P11465 335 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 ADRA2CP18825 462 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 BCL3P20749 454 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 HNF1AP20823 631 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 NPY4RP50391 375 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 IL13RA1P78552 427 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 RAB11BQ15907 218 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 WDR25Q64LD2 544 aaPredicted RBP14.29□□□□□ -0.12
SBDS-205ENST00000617799 AWAT2Q6E213 333 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 RNF144BQ7Z419 303 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 LYPD6Q86Y78 171 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 Q8NFD4 153 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 MED30Q96HR3 178 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 CNTD2Q9H8S5 307 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 ELL3Q9HB65 397 aaPredicted RBP14.29□□□□□ -0.12
SBDS-205ENST00000617799 HES4Q9HCC6 221 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 BATF3Q9NR55 127 aa14.29□□□□□ -0.12
SBDS-205ENST00000617799 MRPS28Q9Y2Q9 187 aaKnown RBP14.29□□□□□ -0.12
SBDS-205ENST00000617799 IGKV1D-17A0A075B6S4 117 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 A0A1B0GW55 424 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 RFPL4AA6NLU0 287 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 IFITM5A6NNB3 132 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 KIAA1324LA8MWY0 1029 aaPredicted RBP14.28□□□□□ -0.12
SBDS-205ENST00000617799 RFPL4AL1F8VTS6 287 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 F8VVB4 439 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 F8VWA3 439 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 TNFRSF13BO14836 293 aaPredicted RBP14.28□□□□□ -0.12
SBDS-205ENST00000617799 KNG1P01042 644 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 DUX4L2P0CJ85 424 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 DUX4L3P0CJ86 424 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 DUX4L4P0CJ87 422 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 DUX4L5P0CJ88 424 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 DUX4L6P0CJ89 424 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 DUX4L7P0CJ90 424 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 CALCBP10092 127 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 SDC2P34741 201 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 NPBWR2P48146 333 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 SNU13P55769 128 aaKnown RBP14.28□□□□□ -0.12
SBDS-205ENST00000617799 ERVK11-1P61568 191 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 DYNC1I2Q13409 638 aaKnown RBP14.28□□□□□ -0.12
SBDS-205ENST00000617799 CTF1Q16619 201 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 DGUOKQ16854 277 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 CR1LQ2VPA4 569 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 C11orf91Q3C1V1 193 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 LRRC10Q5BKY1 277 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 NHLRC3Q5JS37 347 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.28□□□□□ -0.12
SBDS-205ENST00000617799 DUX4L9Q6RFH8 374 aaPredicted RBP14.28□□□□□ -0.12
SBDS-205ENST00000617799 SLC16A12Q6ZSM3 486 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 OR2W3Q7Z3T1 314 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 TMEM185AQ8NFB2 350 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 KCTD12Q96CX2 325 aaKnown RBP14.28□□□□□ -0.12
SBDS-205ENST00000617799 GAFA1Q96PS6 74 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 NKX3-1Q99801 234 aaPredicted RBP14.28□□□□□ -0.12
SBDS-205ENST00000617799 SHARPINQ9H0F6 387 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 RBFOX1Q9NWB1 397 aaKnown RBP14.28□□□□□ -0.12
SBDS-205ENST00000617799 KAAG1Q9UBP8 84 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 DUX4Q9UBX2 424 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 FBLN5Q9UBX5 448 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 STEAP1Q9UHE8 339 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 AK6Q9Y3D8 172 aaKnown RBP14.28□□□□□ -0.12
SBDS-205ENST00000617799 TLN2Q9Y4G6 2542 aa14.28□□□□□ -0.12
SBDS-205ENST00000617799 LOC105371242A0A075B767 164 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 CDRT1O95170 752 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 GTF2F2P13984 249 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 SELLP14151 372 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 PRKACAP17612 351 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 PRDX2P32119 198 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 CEBPDP49716 269 aaPredicted RBP14.27□□□□□ -0.13
SBDS-205ENST00000617799 FGF12P61328 243 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 FAM120AOSQ5T036 256 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 ATPAF1Q5TC12 328 aaPredicted RBP14.27□□□□□ -0.13
SBDS-205ENST00000617799 CD276Q5ZPR3 534 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 ZNF841Q6ZN19 808 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 ZNF788Q6ZQV5 615 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 IL17RELQ6ZVW7 336 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 FAM58AQ8N1B3 248 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 KCNG3Q8TAE7 436 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 H1FXQ92522 213 aaKnown RBP14.27□□□□□ -0.13
SBDS-205ENST00000617799 AP3S1Q92572 193 aa14.27□□□□□ -0.13
SBDS-205ENST00000617799 MALRD1Q5VYJ5 2156 aa14.26□□□□□ -0.13
SBDS-205ENST00000617799 SETD2Q9BYW2 2564 aaPredicted RBP14.26□□□□□ -0.13
SBDS-205ENST00000617799 IGKV1-12A0A0C4DH73 117 aa14.26□□□□□ -0.13
SBDS-205ENST00000617799 FAM90A10PA6NDY2 464 aa14.26□□□□□ -0.13
SBDS-205ENST00000617799 FAM90A18PA6NE21 464 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms