RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 MITD1Q8WV92 249 aa14.83□□□□□ -0.04
PCDHGC3-205ENST00000617641 ESPL1Q14674 2120 aa14.83□□□□□ -0.04
PCDHGC3-205ENST00000617641 RRP8O43159 456 aaKnown RBP14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 GFRA3O60609 400 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 C1orf185Q5T7R7 199 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 ZNF573Q86YE8 665 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 OR5M8Q8NGP6 311 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 RTBDNQ9BSG5 229 aaPredicted RBP14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 PLSCR5A0PG75 271 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 DUSP1P28562 367 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 DHODHQ02127 395 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 GRK1Q15835 563 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM180AQ6UWF9 173 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 Q6ZPA2 131 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 BHLHA15Q7RTS1 189 aaPredicted RBP14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 PHB2Q99623 299 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 WASF3Q9UPY6 502 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 PRR14LQ5THK1 2151 aa14.82□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A10PA6NDY2 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A18PA6NE21 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A16PA6NEW6 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A20PA6NIJ5 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A8PA6NJQ4 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A7PA6NKC0 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A22PA8MWA6 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A12PA8MX19 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A5PA8MXJ8 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A23PA8MXZ1 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A15PP0C7V4 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A13PP0C7W8 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A14PP0C7W9 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM90A24PP0C7X0 464 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 CECR9P0C854 216 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 PRKACAP17612 351 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 GLRA1P23415 457 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 MPV17P39210 176 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 TMEM128Q5BJH2 165 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 KCTD9Q7L273 389 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 TMEM185AQ8NFB2 350 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 MARS2Q96GW9 593 aaKnown RBP14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 SCGB3A2Q96PL1 93 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 ZNF2Q9BSG1 426 aaPredicted RBP14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 OR51I2Q9H344 312 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 C12orf4Q9NQ89 552 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 BSNQ9UPA5 3926 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 NOS1APO75052 506 aaPredicted RBP14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 RHBDL1O75783 438 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 ZNF205O95201 554 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 DUS4LO95620 317 aaKnown RBP14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 OR5H8P0DN80 308 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 RAC2P15153 192 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 PPP3CBP16298 524 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 CXCL2P19875 107 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 PSG7Q13046 419 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 P2RY6Q15077 328 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 NDUFA5Q16718 116 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 NHLRC3Q5JS37 347 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 SLC22A25Q6T423 547 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 BEND4Q6ZU67 534 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 C17orf78Q8N4C9 275 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 EXTL1Q92935 676 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 ELMOD3Q96FG2 381 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 POM121Q96HA1 1249 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 TMPRSS13Q9BYE2 586 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 LIME1Q9H400 295 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 HEXA-AS1Q9H8Q6 139 aa14.81□□□□□ -0.04
PCDHGC3-205ENST00000617641 PGAM2P15259 253 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 CALCRP30988 508 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 PTGER4P35408 488 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 IKZF1Q13422 519 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 WDR86Q86TI4 376 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 OR8H1Q8NGG4 311 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 KLF14Q8TD94 323 aaPredicted RBP14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 RTL8AQ9BWD3 113 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 NECAP2Q9NVZ3 263 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 ACACAQ13085 2346 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 FXYD6-FXYD2A0A087WZ82 144 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 HSPB6O14558 160 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 RGS11O94810 467 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 CRHP06850 196 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 SORDQ00796 357 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 IL24Q13007 206 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 SLC9A3R2Q15599 337 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 TBR1Q16650 682 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 KRTCAP3Q53RY4 240 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 ZNF660Q6AZW8 331 aaPredicted RBP14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 MICU1Q9BPX6 476 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 ADAT1Q9BUB4 502 aaKnown RBP14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 FXYD6Q9H0Q3 95 aa14.8□□□□□ -0.04
PCDHGC3-205ENST00000617641 OR5H1A6NKK0 313 aa14.79□□□□□ -0.04
PCDHGC3-205ENST00000617641 IQCF6A8MYZ5 107 aa14.79□□□□□ -0.04
PCDHGC3-205ENST00000617641 IGLV1-44P01699 117 aa14.79□□□□□ -0.04
PCDHGC3-205ENST00000617641 NFYAP23511 347 aaPredicted RBP14.79□□□□□ -0.04
PCDHGC3-205ENST00000617641 PMELP40967 661 aa14.79□□□□□ -0.04
PCDHGC3-205ENST00000617641 TMEM211Q6ICI0 200 aa14.79□□□□□ -0.04
PCDHGC3-205ENST00000617641 ZNF474Q6S9Z5 364 aaPredicted RBP14.79□□□□□ -0.04
PCDHGC3-205ENST00000617641 FAM57AQ8TBR7 257 aa14.79□□□□□ -0.04
PCDHGC3-205ENST00000617641 SEC22AQ96IW7 307 aa14.79□□□□□ -0.04
PCDHGC3-205ENST00000617641 PKIBQ9C010 78 aa14.79□□□□□ -0.04
PCDHGC3-205ENST00000617641 ZNF286AQ9HBT8 521 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms