RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TRMT10AQ8TBZ6 339 aaKnown RBP7.22□□□□□ -1.25
GPC6-202ENST00000617456 POP5Q969H6 163 aaKnown RBP7.22□□□□□ -1.25
GPC6-202ENST00000617456 RCN3Q96D15 328 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 PACRGQ96M98 296 aaPredicted RBP7.22□□□□□ -1.25
GPC6-202ENST00000617456 TSPAN32Q96QS1 320 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 GPX7Q96SL4 187 aaPredicted RBP7.22□□□□□ -1.25
GPC6-202ENST00000617456 MFFQ9GZY8 342 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 KRCC1Q9NPI7 259 aaPredicted RBP7.22□□□□□ -1.25
GPC6-202ENST00000617456 ZFP57Q9NU63 452 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 SAMD4AQ9UPU9 718 aaKnown RBP7.22□□□□□ -1.25
GPC6-202ENST00000617456 WIPI2Q9Y4P8 454 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 ENPP4Q9Y6X5 453 aa7.22□□□□□ -1.25
GPC6-202ENST00000617456 PPIAL4EA0A075B759 164 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 PPIAL4CA0A0B4J2A2 164 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 IGHV1-69-2A0A0G2JMI3 117 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 EFCAB9A8MZ26 197 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 PPIAL4DF5H284 164 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 NME4O00746 187 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 XKRYO14609 159 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 IMPA2O14732 288 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 ACOT8O14734 319 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 PDCD5O14737 125 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 FFAR1O14842 300 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 HPGDSO60760 199 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 CRYBA1P05813 215 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 CD55P08174 381 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 PPIAL4FP0DN26 164 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 ZNF32P17041 273 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 TNFRSF1BP20333 461 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 MSR1P21757 451 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 PRTN3P24158 256 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 FMO3P31513 532 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 MMP15P51511 669 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 CTXN1P60606 82 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 CDC42P60953 191 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 RRAS2P62070 204 aaPredicted RBP7.21□□□□□ -1.26
GPC6-202ENST00000617456 SNRPEP62304 92 aaKnown RBP7.21□□□□□ -1.26
GPC6-202ENST00000617456 IL13RA1P78552 427 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 PSG4Q00888 419 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 CD47Q08722 323 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 TSTQ16762 297 aaKnown RBP7.21□□□□□ -1.26
GPC6-202ENST00000617456 ETFRF1Q6IPR1 90 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 ATRAIDQ6UW56 229 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 ZNF730Q6ZMV8 503 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 RASSF6Q6ZTQ3 369 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 NRARPQ7Z6K4 114 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 NRMQ8IXM6 262 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 BCL6BQ8N143 479 aaPredicted RBP7.21□□□□□ -1.26
GPC6-202ENST00000617456 NPEPL1Q8NDH3 523 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 DUSP18Q8NEJ0 188 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 OR1J1Q8NGS3 322 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 AP3S1Q92572 193 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 DVL3Q92997 716 aaPredicted RBP7.21□□□□□ -1.26
GPC6-202ENST00000617456 SLAMF9Q96A28 289 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 MRGPRFQ96AM1 343 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 ELMOD3Q96FG2 381 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 TIMD4Q96H15 378 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 CMSS1Q9BQ75 279 aaKnown RBP7.21□□□□□ -1.26
GPC6-202ENST00000617456 IFT27Q9BW83 186 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 OR2H1Q9GZK4 316 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 MS4A7Q9GZW8 240 aaPredicted RBP7.21□□□□□ -1.26
GPC6-202ENST00000617456 NRIP3Q9NQ35 241 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 DECR2Q9NUI1 292 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 DCAF13Q9NV06 445 aaKnown RBP7.21□□□□□ -1.26
GPC6-202ENST00000617456 CLEC5AQ9NY25 188 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 ZNF281Q9Y2X9 895 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 U3KQV3 271 aa7.21□□□□□ -1.26
GPC6-202ENST00000617456 TCRBV3S1A0A5B6 114 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 PRSS37A4D1T9 235 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 C5orf49A4QMS7 147 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 A8MWP6 167 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 PTGES3LE9PB15 166 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 IFNL4K9M1U5 179 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 NDUFB2O95178 105 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 SLC2A10O95528 541 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 FSTL3O95633 263 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 TXNDC12O95881 172 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 SERPINA1P01009 418 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 FSHBP01225 129 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 SCGB1A1P11684 91 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 CCL2P13500 99 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 MAKP20794 623 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 ATP6V1B2P21281 511 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 OMGP23515 440 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 MC5RP33032 325 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 POLR2IP36954 125 aaKnown RBP7.2□□□□□ -1.26
GPC6-202ENST00000617456 GSK3BP49841 420 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 ERVS71-1P61550 626 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 BTG1P62324 171 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 ADARB1P78563 741 aaKnown RBP7.2□□□□□ -1.26
GPC6-202ENST00000617456 POU4F2Q12837 409 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 NEDD8Q15843 81 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 FAM189A2Q15884 450 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 C10orf91Q5T1B1 145 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 SYT6Q5T7P8 510 aaPredicted RBP7.2□□□□□ -1.26
GPC6-202ENST00000617456 OR8G2PQ6IF36 304 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 LEG1Q6P5S2 330 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 DPY19L2P2Q6ZN68 376 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 DOK3Q7L591 496 aa7.2□□□□□ -1.26
GPC6-202ENST00000617456 VTCN1Q7Z7D3 282 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms