RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 TMEM133Q9H2Q1 129 aa19.98■□□□□ 0.79
PTPRF-216ENST00000617451 ZAR1LA6NP61 321 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 H3BUI4 141 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 MITFO75030 526 aaPredicted RBP19.97■□□□□ 0.79
PTPRF-216ENST00000617451 CD33P20138 364 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 PEX2P28328 305 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 GRK1Q15835 563 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 C12orf73Q69YU5 71 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 ZBTB49Q6ZSB9 765 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 GID4Q8IVV7 300 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 EMG1Q92979 244 aaKnown RBP19.97■□□□□ 0.79
PTPRF-216ENST00000617451 IL4I1Q96RQ9 567 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 CHST6Q9GZX3 395 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 IL36RNQ9UBH0 155 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 POMPQ9Y244 141 aa19.97■□□□□ 0.79
PTPRF-216ENST00000617451 A0A1W2PRX2 142 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 PSPNO60542 156 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 IGLL1P15814 213 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 GABRR1P24046 479 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 HTR1DP28221 377 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 Q8IYB0 196 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 ENTHD1Q8IYW4 607 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 CCDC54Q8NEL0 328 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 OR4P4Q8NGL7 312 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 BORCS8Q96FH0 119 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 TBX5Q99593 518 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 KRT84Q9NSB2 600 aa19.96■□□□□ 0.79
PTPRF-216ENST00000617451 COL7A1Q02388 2944 aa19.95■□□□□ 0.78
PTPRF-216ENST00000617451 A0A1W2PQL4 384 aaPredicted RBP19.95■□□□□ 0.78
PTPRF-216ENST00000617451 MMP23AO75900 390 aa19.95■□□□□ 0.78
PTPRF-216ENST00000617451 SERPINA3P01011 423 aa19.95■□□□□ 0.78
PTPRF-216ENST00000617451 ZNF91Q05481 1191 aa19.95■□□□□ 0.78
PTPRF-216ENST00000617451 IL18R1Q13478 541 aa19.95■□□□□ 0.78
PTPRF-216ENST00000617451 C16orf82Q7Z2V1 217 aa19.95■□□□□ 0.78
PTPRF-216ENST00000617451 RBFOX1Q9NWB1 397 aaKnown RBP19.95■□□□□ 0.78
PTPRF-216ENST00000617451 METTL15A6NJ78 407 aa19.94■□□□□ 0.78
PTPRF-216ENST00000617451 GYG2O15488 501 aa19.94■□□□□ 0.78
PTPRF-216ENST00000617451 OR2T7P0C7T2 308 aa19.94■□□□□ 0.78
PTPRF-216ENST00000617451 DUSP1P28562 367 aa19.94■□□□□ 0.78
PTPRF-216ENST00000617451 NPBWR2P48146 333 aa19.94■□□□□ 0.78
PTPRF-216ENST00000617451 DNAL1Q4LDG9 190 aa19.94■□□□□ 0.78
PTPRF-216ENST00000617451 TCTEX1D4Q5JR98 221 aa19.94■□□□□ 0.78
PTPRF-216ENST00000617451 C10orf35Q96D05 121 aa19.94■□□□□ 0.78
PTPRF-216ENST00000617451 ADI1Q9BV57 179 aa19.94■□□□□ 0.78
PTPRF-216ENST00000617451 WARS2Q9UGM6 360 aaKnown RBP19.94■□□□□ 0.78
PTPRF-216ENST00000617451 UBE2J1Q9Y385 318 aaPredicted RBP19.94■□□□□ 0.78
PTPRF-216ENST00000617451 MGST3O14880 152 aa19.93■□□□□ 0.78
PTPRF-216ENST00000617451 SULT1C4O75897 302 aa19.93■□□□□ 0.78
PTPRF-216ENST00000617451 PF4V1P10720 104 aa19.93■□□□□ 0.78
PTPRF-216ENST00000617451 ERP29P30040 261 aaKnown RBP19.93■□□□□ 0.78
PTPRF-216ENST00000617451 ZNF146Q15072 292 aa19.93■□□□□ 0.78
PTPRF-216ENST00000617451 CENPVQ7Z7K6 275 aaPredicted RBP19.93■□□□□ 0.78
PTPRF-216ENST00000617451 FAM58AQ8N1B3 248 aa19.93■□□□□ 0.78
PTPRF-216ENST00000617451 PRSS35Q8N3Z0 413 aa19.93■□□□□ 0.78
PTPRF-216ENST00000617451 DNAAF1Q8NEP3 725 aa19.93■□□□□ 0.78
PTPRF-216ENST00000617451 LIN7BQ9HAP6 207 aa19.93■□□□□ 0.78
PTPRF-216ENST00000617451 DPM3Q9P2X0 92 aa19.93■□□□□ 0.78
PTPRF-216ENST00000617451 TRBV2A0A0J9YWF9 115 aa19.92■□□□□ 0.78
PTPRF-216ENST00000617451 MPIG6BO95866 241 aa19.92■□□□□ 0.78
PTPRF-216ENST00000617451 BCL3P20749 454 aa19.92■□□□□ 0.78
PTPRF-216ENST00000617451 OR3A1P47881 315 aa19.92■□□□□ 0.78
PTPRF-216ENST00000617451 RBP2P50120 134 aa19.92■□□□□ 0.78
PTPRF-216ENST00000617451 P2RX3P56373 397 aa19.92■□□□□ 0.78
PTPRF-216ENST00000617451 KDM4DQ6B0I6 523 aa19.92■□□□□ 0.78
PTPRF-216ENST00000617451 TRAPPC6BQ86SZ2 158 aa19.92■□□□□ 0.78
PTPRF-216ENST00000617451 ABHD12Q8N2K0 398 aa19.92■□□□□ 0.78
PTPRF-216ENST00000617451 PP6455Q8WZ26 134 aa19.92■□□□□ 0.78
PTPRF-216ENST00000617451 AKR1E2Q96JD6 320 aa19.92■□□□□ 0.78
PTPRF-216ENST00000617451 LOC107986453A0A1B0GWG9 222 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 TCRBV4S1A1TA0A5B7 111 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 G3V2T6 193 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 ENTPD6O75354 484 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 APOL3O95236 402 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 CD24P25063 80 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 HTR1FP30939 366 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 ATP1B3P54709 279 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 BDH1Q02338 343 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 SPIN3Q5JUX0 258 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 BAIAP2L2Q6UXY1 529 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 CCDC121Q6ZUS5 278 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.91■□□□□ 0.78
PTPRF-216ENST00000617451 TSSC4Q9Y5U2 329 aaPredicted RBP19.91■□□□□ 0.78
PTPRF-216ENST00000617451 DNAH9Q9NYC9 4486 aa19.91■□□□□ 0.78
PTPRF-216ENST00000617451 IGKV1-9A0A0C4DH69 117 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 CYB5AP00167 134 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 UBCP0CG48 685 aaKnown RBP19.9■□□□□ 0.78
PTPRF-216ENST00000617451 CALCBP10092 127 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 BRS3P32247 399 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 CDC42P60953 191 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 OR52W1Q6IF63 320 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 RTN4RL2Q86UN3 420 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 RDH10Q8IZV5 341 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 OR10H4Q8NGA5 316 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 STMN2Q93045 179 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 SLC7A6OSQ96CW6 309 aaPredicted RBP19.9■□□□□ 0.78
PTPRF-216ENST00000617451 GLS2Q9UI32 602 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 KIAA2026Q5HYC2 2103 aa19.9■□□□□ 0.78
PTPRF-216ENST00000617451 K7EIL1 84 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 IGLV1-47P01700 117 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 PF4P02776 101 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms