RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 PTGER4P35408 488 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 UBA52P62987 128 aaKnown RBP13.49□□□□□ -0.25
NR1H3-235ENST00000616973 RTP5Q14D33 572 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 DEFB109BQ30KR1 87 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 SLAMF9Q96A28 289 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 SARAFQ96BY9 339 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 LIME1Q9H400 295 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 MED9Q9NWA0 146 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 RCC2Q9P258 522 aaKnown RBP13.49□□□□□ -0.25
NR1H3-235ENST00000616973 BCL2L11O43521 198 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 FBXW12Q6X9E4 464 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 Q6ZT83 130 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 LINC00596Q86U02 117 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 DYRK2Q92630 601 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 TRIB1Q96RU8 372 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 PLK3Q9H4B4 646 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 ZNF442Q9H7R0 627 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 MTCH1Q9NZJ7 389 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 MBD2Q9UBB5 411 aa13.49□□□□□ -0.25
NR1H3-235ENST00000616973 ZNF629Q9UEG4 869 aaPredicted RBP13.49□□□□□ -0.25
NR1H3-235ENST00000616973 ESPL1Q14674 2120 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 KANTRA0A1W2PQU2 76 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 CRYM-AS1A6NIL9 109 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 TRAPPC2LH3BP13 241 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 TM4SF5O14894 197 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 AP2S1P53680 142 aaPredicted RBP13.48□□□□□ -0.25
NR1H3-235ENST00000616973 UCP3P55916 312 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 GNG3P63215 75 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 MRPL49Q13405 166 aaKnown RBP13.48□□□□□ -0.25
NR1H3-235ENST00000616973 BRICD5Q6PL45 260 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 SLC22A25Q6T423 547 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 COMMD7Q86VX2 200 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 ZNF573Q86YE8 665 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 SGPP2Q8IWX5 399 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 WNT2BQ93097 391 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 PIK3IP1Q96FE7 263 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 VRK1Q99986 396 aaPredicted RBP13.48□□□□□ -0.25
NR1H3-235ENST00000616973 PKIBQ9C010 78 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 KCNMB2Q9Y691 235 aa13.48□□□□□ -0.25
NR1H3-235ENST00000616973 ADAP1O75689 374 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 KNG1P01042 644 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 ZNF728P0DKX0 622 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 LYL1P12980 280 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 RBMXP38159 391 aaKnown RBP13.47□□□□□ -0.25
NR1H3-235ENST00000616973 NBL1P41271 181 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 UBE2NP61088 152 aaKnown RBP13.47□□□□□ -0.25
NR1H3-235ENST00000616973 GABRA6Q16445 453 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 INO80CQ6PI98 192 aaPredicted RBP13.47□□□□□ -0.25
NR1H3-235ENST00000616973 ALKAL2Q6UX46 152 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 INO80EQ8NBZ0 244 aaPredicted RBP13.47□□□□□ -0.25
NR1H3-235ENST00000616973 ANGPTL6Q8NI99 470 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 EXTL1Q92935 676 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 C2orf50Q96LR7 162 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 RNF126Q9BV68 326 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 RHOFQ9HBH0 211 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 C1orf123Q9NWV4 160 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 NMBP08949 121 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 IL24Q13007 206 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 IL15RAQ13261 267 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 PDCD1Q15116 288 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 Q6ZPA2 131 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 OR5M9Q8NGP3 310 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 ST8SIA2Q92186 375 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 GTF3AQ92664 365 aaKnown RBP13.47□□□□□ -0.25
NR1H3-235ENST00000616973 MARS2Q96GW9 593 aaKnown RBP13.47□□□□□ -0.25
NR1H3-235ENST00000616973 PRRX2Q99811 253 aa13.47□□□□□ -0.25
NR1H3-235ENST00000616973 FAM221AA4D161 298 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 F8VVB4 439 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 F8VWA3 439 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 NAPSAO96009 420 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 GLP1RP43220 463 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 P2RX3P56373 397 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 IGFL3Q6UXB1 125 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 GCNT2Q8N0V5 402 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 BHLHE23Q8NDY6 225 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 C1orf162Q8NEQ5 155 aaPredicted RBP13.46□□□□□ -0.25
NR1H3-235ENST00000616973 PCNPQ8WW12 178 aaKnown RBP13.46□□□□□ -0.25
NR1H3-235ENST00000616973 MOB3AQ96BX8 217 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 GALNT14Q96FL9 552 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 METTL8Q9H825 291 aaKnown RBP13.46□□□□□ -0.25
NR1H3-235ENST00000616973 CDH20Q9HBT6 801 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 LHX6Q9UPM6 363 aa13.46□□□□□ -0.25
NR1H3-235ENST00000616973 AHRRA9YTQ3 701 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 SYNGR1O43759 233 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 SMPD2O60906 423 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 LILRA1O75019 489 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 WISP2O76076 250 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 COX5AP20674 150 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 FCGR2CP31995 323 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 KIR2DL2P43627 348 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-235ENST00000616973 NOVA1P51513 510 aaKnown RBP13.45□□□□□ -0.26
NR1H3-235ENST00000616973 IL13RA2Q14627 380 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 OR2T2Q6IF00 324 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 OR2A2Q6IF42 318 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 RGS7BPQ6MZT1 257 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-235ENST00000616973 HAGHLQ6PII5 290 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-235ENST00000616973 ZADH2Q8N4Q0 377 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 POC1AQ8NBT0 407 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 OR10C1Q96KK4 312 aa13.45□□□□□ -0.26
NR1H3-235ENST00000616973 OR51I2Q9H344 312 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms