RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	LRFN1	Q9P244	771 aa		12.07	□□□□□ -0.48
CACNA1C-231	ENST00000616390	OSGIN2	Q9Y236	505 aa		12.07	□□□□□ -0.48
CACNA1C-231	ENST00000616390	LRRC3C	A6NJW4	275 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ZNF716	A6NP11	495 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	NRAS	P01111	189 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PPIA	P62937	165 aa	Known RBP	12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CDCP2	Q5VXM1	449 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	DEFB123	Q8N688	67 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	BPIFC	Q8NFQ6	507 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SHARPIN	Q9H0F6	387 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ARRDC1-AS1	Q9H2J1	176 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	LDAH	Q9H6V9	325 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	MED9	Q9NWA0	146 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PLA2G3	Q9NZ20	509 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	AK3	Q9UIJ7	227 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	FAM166B	A8MTA8	275 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SERPINE3	A8MV23	424 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	IFNA4	P05014	189 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CRYGS	P22914	178 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	RBP2	P50120	134 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	AIMP2	Q13155	320 aa	Known RBP	12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	RPUSD3	Q6P087	351 aa	Known RBP	12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ZNF585A	Q6P3V2	769 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	FOXL2NB	Q6ZUU3	175 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	LHFPL1	Q86WI0	220 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	OR2V1	Q8NHB1	315 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	RNASE11	Q8TAA1	199 aa	Known RBP	12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SCGB3A2	Q96PL1	93 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CMSS1	Q9BQ75	279 aa	Known RBP	12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	NMES1	Q9C002	83 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	GHRL	Q9UBU3	117 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	FOXI3	A8MTJ6	420 aa	Predicted RBP	12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ZNF806	P0C7X5	589 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PTGER4	P35408	488 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	TSPO2	Q5TGU0	170 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PLCXD3	Q63HM9	321 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CLEC9A	Q6UXN8	241 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	LINC00696	Q6ZRV3	163 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SULF2	Q8IWU5	870 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	EMG1	Q92979	244 aa	Known RBP	12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PIK3IP1	Q96FE7	263 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390		Q96M66	194 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SULT4A1	Q9BR01	284 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ANAPC10	Q9UM13	185 aa		12.06	□□□□□ -0.48
CACNA1C-231	ENST00000616390		A0A1B0GW55	424 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ZNF587B	E7ETH6	402 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	DUX4L2	P0CJ85	424 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	DUX4L3	P0CJ86	424 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	DUX4L4	P0CJ87	422 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	DUX4L5	P0CJ88	424 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	DUX4L6	P0CJ89	424 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	DUX4L7	P0CJ90	424 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	RBMX	P38159	391 aa	Known RBP	12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CYCS	P99999	105 aa	Known RBP	12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SLC16A13	Q7RTY0	426 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	FBXL14	Q8N1E6	418 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	OR5T2	Q8NGG2	359 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SF3B5	Q9BWJ5	86 aa	Known RBP	12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CALHM2	Q9HA72	323 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	BIN3	Q9NQY0	253 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	DUX4	Q9UBX2	424 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	DSP	P15924	2871 aa	Known RBP	12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	FIGNL2	A6NMB9	653 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	MSTN	O14793	375 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	OR5H8	P0DN80	308 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ZNF133	P52736	654 aa	Predicted RBP	12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	C5orf24	Q7Z6I8	188 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CPEB3	Q8NE35	698 aa	Known RBP	12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	KCNE4	Q8WWG9	221 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CLUHP3	Q96NS8	147 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	TM2D1	Q9BX74	207 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	MRPL37	Q9BZE1	423 aa	Known RBP	12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SMIM3	Q9BZL3	60 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	OR2H1	Q9GZK4	316 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	LIME1	Q9H400	295 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	TMEM231	Q9H6L2	316 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	BARX1	Q9HBU1	254 aa	Predicted RBP	12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	RAB18	Q9NP72	206 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ASCL3	Q9NQ33	180 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	TIMM10B	Q9Y5J6	103 aa		12.05	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PCSK5	Q92824	1860 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	IGKV1-12	A0A0C4DH73	117 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390		J3QW42	95 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	IGKV1D-12	P01611	117 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CST2	P09228	141 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	IAH1	Q2TAA2	248 aa	Predicted RBP	12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PHLDA2	Q53GA4	152 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PABPC1L2A	Q5JQF8	200 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PEG10	Q86TG7	708 aa	Known RBP	12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	LRRC46	Q96FV0	321 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SIGLEC12	Q96PQ1	595 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	GPR35	Q9HC97	309 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ST3GAL6	Q9Y274	331 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	LSM5	Q9Y4Y9	91 aa	Known RBP	12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	IFNA2	P01563	188 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	TPT1	P13693	172 aa	Known RBP	12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ALDH3B1	P43353	468 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ZXDA	P98168	799 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CNN3	Q15417	329 aa	Known RBP	12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms