RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 NPRL2Q8WTW4 380 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 TMEM234Q8WY98 164 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 SLC35B3Q9H1N7 401 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 PITPNC1Q9UKF7 332 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 TRAV36DV7A0A075B6V5 113 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 SOX15O60248 233 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 WNT11O96014 354 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 SP1P08047 785 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 UCNP55089 124 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 C2orf76Q3KRA6 126 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 OTPQ5XKR4 325 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 FOXRED2Q8IWF2 684 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 JAGN1Q8N5M9 183 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 FADS6Q8N9I5 356 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 ZSCAN4Q8NAM6 433 aaPredicted RBP11.44□□□□□ -0.58
FOXN3-219ENST00000615335 OR10A7Q8NGE5 316 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 OR8S1Q8NH09 359 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 CD300LFQ8TDQ1 290 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 FAM3DQ96BQ1 224 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 C5orf34Q96MH7 638 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 FOXN4Q96NZ1 517 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 PBDC1Q9BVG4 233 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 SLCO5A1Q9H2Y9 848 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 SMDT1Q9H4I9 107 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 GTF2A1LQ9UNN4 478 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 B9D1Q9UPM9 204 aa11.44□□□□□ -0.58
FOXN3-219ENST00000615335 FREM3P0C091 2139 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 LOC100289279A0A1B0GTE1 492 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 MEIS3P1A6NDR6 274 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 SLC17A2O00624 439 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 CBR3O75828 277 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 OR6A2O95222 327 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 AMY2AP04746 511 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 OR5AC1P0C628 307 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 THBS4P35443 961 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 ERVFC1-1P60608 527 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 TLE4Q04727 773 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 C1QL3Q5VWW1 255 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 DMRTA1Q5VZB9 504 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 SLC18B1Q6NT16 456 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 SLC35D2Q76EJ3 337 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 GRINAQ7Z429 371 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 GALNTL5Q7Z4T8 443 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 ZNF573Q86YE8 665 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 SULF2Q8IWU5 870 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 MDS2Q8NDY4 140 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 CPEB3Q8NE35 698 aaKnown RBP11.43□□□□□ -0.58
FOXN3-219ENST00000615335 SLC24A4Q8NFF2 622 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 GPX8Q8TED1 209 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 ST8SIA1Q92185 356 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 FAM173AQ9BQD7 235 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 KCNK15Q9H427 330 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 OR2S2Q9NQN1 319 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 SLC22A13Q9Y226 551 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 BOD1L1Q8NFC6 3051 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 CACNA1GO43497 2377 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 C5orf51A6NDU8 294 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 EEF1E1-BLOC1S5C9J1V9 151 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 WISP1O95388 367 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 QDPRP09417 244 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 TNFSF10P50591 281 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 PRSS54Q6PEW0 395 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 IGFL2Q6UWQ7 119 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 ZNF679Q8IYX0 411 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 ADPRHL1Q8NDY3 354 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 OR2M7Q8NG81 312 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 RNF128Q8TEB7 428 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 RNF126Q9BV68 326 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 SLC17A5Q9NRA2 495 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 BOKQ9UMX3 212 aaPredicted RBP11.43□□□□□ -0.58
FOXN3-219ENST00000615335 MMP24Q9Y5R2 645 aa11.43□□□□□ -0.58
FOXN3-219ENST00000615335 TNRC6AQ8NDV7 1962 aaKnown RBP11.43□□□□□ -0.58
FOXN3-219ENST00000615335 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 PRSS37A4D1T9 235 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 PINLYPA6NC86 204 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 SHISA8B8ZZ34 492 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 SMAD9O15198 467 aaKnown RBP11.42□□□□□ -0.58
FOXN3-219ENST00000615335 NME2P1O60361 137 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 SLC16A7O60669 478 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 CDC14BO60729 498 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 RAB6AP20340 208 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 CDKN1BP46527 198 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 OR3A1P47881 315 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 POLR2HP52434 150 aaKnown RBP11.42□□□□□ -0.58
FOXN3-219ENST00000615335 RPL27P61353 136 aaKnown RBP11.42□□□□□ -0.58
FOXN3-219ENST00000615335 RBX1P62877 108 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 DLK1P80370 383 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 ZNF766Q5HY98 468 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 ZDHHC22Q8N966 263 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 NAXEQ8NCW5 288 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 ZCCHC14Q8WYQ9 949 aaKnown RBP11.42□□□□□ -0.58
FOXN3-219ENST00000615335 DVL3Q92997 716 aaPredicted RBP11.42□□□□□ -0.58
FOXN3-219ENST00000615335 EIF5A2Q9GZV4 153 aaKnown RBP11.42□□□□□ -0.58
FOXN3-219ENST00000615335 DKKL1Q9UK85 242 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 DHDHQ9UQ10 334 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 KLF13Q9Y2Y9 288 aaPredicted RBP11.42□□□□□ -0.58
FOXN3-219ENST00000615335 AMDHD2Q9Y303 409 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 ATMQ13315 3056 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 MED12Q93074 2177 aa11.42□□□□□ -0.58
FOXN3-219ENST00000615335 LOC100509620A0A075B734 347 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms