RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 MMP28Q9H239 520 aa8.54□□□□□ -1.04
TNFRSF9-204ENST00000615230 IGKV1-8A0A0C4DH67 115 aa8.54□□□□□ -1.04
TNFRSF9-204ENST00000615230 RBP4P02753 201 aa8.54□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZNF14P17017 642 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF9-204ENST00000615230 RAB5CP51148 216 aa8.54□□□□□ -1.04
TNFRSF9-204ENST00000615230 C20orf204Q6ZNR8 217 aa8.54□□□□□ -1.04
TNFRSF9-204ENST00000615230 NMES1Q9C002 83 aa8.54□□□□□ -1.04
TNFRSF9-204ENST00000615230 RNF122Q9H9V4 155 aa8.54□□□□□ -1.04
TNFRSF9-204ENST00000615230 FXYD1O00168 92 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 SMAGPQ0VAQ4 97 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZNF816Q0VGE8 651 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 MRPL14Q6P1L8 145 aaKnown RBP8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 DVL3Q92997 716 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 VWCEQ96DN2 955 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 GPX7Q96SL4 187 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 SSX3Q99909 188 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 CHST5Q9GZS9 411 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 OR2F2O95006 317 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 IGFBP1P08833 259 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 NPBWR1P48145 328 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 MMP15P51511 669 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 OR2F1Q13607 317 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 FAHD2BQ6P2I3 314 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 TCTEX1D1Q8N7M0 179 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 OR1L1Q8NH94 360 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 RTN4IP1Q8WWV3 396 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 FAHD2AQ96GK7 314 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 MTCH1Q9NZJ7 389 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 STARD10Q9Y365 291 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 CPN1P15169 458 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 CCR6P51684 374 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 HABP2Q14520 560 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 DESI1Q6ICB0 168 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 DBX2Q6ZNG2 339 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 ST6GALNAC3Q8NDV1 305 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 PRDM14Q9GZV8 571 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 OR2D2Q9H210 308 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 LOC105371242A0A075B767 164 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 F8W036 122 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 FCGR3BO75015 233 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 SNAPINO95295 136 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 ASAH2BP0C7U1 165 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 TRAPPC2P0DI81 140 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 TRAPPC2BP0DI82 140 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 PGA4P0DJD7 388 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 BCL3P20749 454 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 HRH1P35367 487 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 AKR1D1P51857 326 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 TGIF1Q15583 401 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 TNXAQ16473 311 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 ZNF674Q2M3X9 581 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 TEX30Q5JUR7 227 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 TSPO2Q5TGU0 170 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 SUN5Q8TC36 379 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 RPL3LQ92901 407 aaKnown RBP8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 DHRS9Q9BPW9 319 aa8.53□□□□□ -1.04
TNFRSF9-204ENST00000615230 TMEM272A0A1B0GTI8 110 aa8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 ORM1P02763 201 aa8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 POLR2IP36954 125 aaKnown RBP8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 FLI1Q01543 452 aaPredicted RBP8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 SLC25A47Q6Q0C1 308 aa8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 BATF2Q8N1L9 274 aa8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 TMEM52Q8NDY8 209 aa8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 FLYWCH2Q96CP2 140 aaKnown RBP8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 MISP3Q96FF7 219 aa8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 TIMP4Q99727 224 aa8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 SMCO4Q9NRQ5 59 aa8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 CCL27Q9Y4X3 112 aa8.52□□□□□ -1.04
TNFRSF9-204ENST00000615230 IGHV1-69-2A0A0G2JMI3 117 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 TMEM235A6NFC5 223 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 LIPFP07098 398 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 FGF9P31371 208 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 LPAR6P43657 344 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 HLA-DRB3P79483 266 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 GGNBP1Q5YKI7 109 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 ADAM5Q6NVV9 412 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 MSRB3Q8IXL7 192 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 MUC15Q8N387 334 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 OPRK1P41145 380 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 Q3ZCU0 254 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 SPANXN5Q5MJ07 72 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 ZNF770Q6IQ21 691 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 RHOUQ7L0Q8 258 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 SLC51BQ86UW2 128 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 MRGPRDQ8TDS7 321 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 PECRQ9BY49 303 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 ISG20L2Q9H9L3 353 aaKnown RBP8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 TINAGQ9UJW2 476 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 IGHV3-64DA0A0J9YX35 117 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 RPL36A-HNRNPH2H7BZ11 118 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 HRKO00198 91 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 DVL1O14640 695 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 CCL2P13500 99 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 RPS4Y1P22090 263 aaKnown RBP8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 DVL1P1P54792 670 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 ASAH1Q13510 395 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 FAM209BQ5JX69 171 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 COMMD7Q86VX2 200 aa8.52□□□□□ -1.05
TNFRSF9-204ENST00000615230 FAM219AQ8IW50 185 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms