RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CBY1Q9Y3M2 126 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 TRAV1-2A0A0B4J238 106 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 H7C417 338 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 BHLHE40O14503 412 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF25P17030 456 aaPredicted RBP9.54□□□□□ -0.88
FAM3A-221ENST00000612856 TAGLN2P37802 199 aaKnown RBP9.54□□□□□ -0.88
FAM3A-221ENST00000612856 GSK3AP49840 483 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 NPY4RP50391 375 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 UBE2KP61086 200 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 Q499Y3 187 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 WDR54Q9H977 334 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 INPP5EQ9NRR6 644 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 MTFP1Q9UDX5 166 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 GSTZ1O43708 216 aaPredicted RBP9.54□□□□□ -0.88
FAM3A-221ENST00000612856 RAMP1O60894 148 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 GAS1P54826 345 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 PLGLAQ15195 96 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 TSPO2Q5TGU0 170 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 DMKNQ6E0U4 476 aaPredicted RBP9.54□□□□□ -0.88
FAM3A-221ENST00000612856 DND1Q8IYX4 353 aaKnown RBP9.54□□□□□ -0.88
FAM3A-221ENST00000612856 PSMF1Q92530 271 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 GPR61Q9BZJ8 451 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 NELFAQ9H3P2 528 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 ADGRL4Q9HBW9 690 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 TIMM10BQ9Y5J6 103 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 CFAP54Q96N23 3096 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 CELSR3Q9NYQ7 3312 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 C19orf67A6NJJ6 358 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 CYB5BO43169 146 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 SPRY1O43609 319 aaPredicted RBP9.54□□□□□ -0.88
FAM3A-221ENST00000612856 ADAP1O75689 374 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 GLSO94925 669 aaPredicted RBP9.54□□□□□ -0.88
FAM3A-221ENST00000612856 IL2RGP31785 369 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 RBP2P50120 134 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 C2orf76Q3KRA6 126 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 SLC25A26Q70HW3 274 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 EIF4E3Q8N5X7 224 aaKnown RBP9.54□□□□□ -0.88
FAM3A-221ENST00000612856 C15orf54Q8N8G6 183 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 OR2M3Q8NG83 312 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 OR10AD1Q8NGE0 317 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 FAM213BQ8TBF2 198 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 LIN37Q96GY3 246 aaPredicted RBP9.54□□□□□ -0.88
FAM3A-221ENST00000612856 TSPAN32Q96QS1 320 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 ARHGDIGQ99819 225 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF552Q9H707 407 aaPredicted RBP9.54□□□□□ -0.88
FAM3A-221ENST00000612856 MRPS18AQ9NVS2 196 aaKnown RBP9.54□□□□□ -0.88
FAM3A-221ENST00000612856 ZMIZ1Q9ULJ6 1067 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 KCNIP3Q9Y2W7 256 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 KPTNQ9Y664 436 aa9.54□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF106Q9H2Y7 1883 aaKnown RBP9.53□□□□□ -0.88
FAM3A-221ENST00000612856 TMEM272A0A1B0GTI8 110 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 MDKP21741 143 aaPredicted RBP9.53□□□□□ -0.88
FAM3A-221ENST00000612856 RPL7L1Q6DKI1 246 aaKnown RBP9.53□□□□□ -0.88
FAM3A-221ENST00000612856 PXKQ7Z7A4 578 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 SLC43A2Q8N370 569 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 OR2Z1Q8NG97 314 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 OR5AP2Q8NGF4 316 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 NUDCD2Q8WVJ2 157 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 RND1Q92730 232 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 OPN3Q9H1Y3 402 aaPredicted RBP9.53□□□□□ -0.88
FAM3A-221ENST00000612856 TRAPPC2LQ9UL33 140 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 TNFSF18Q9UNG2 199 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 A0A087WV48 116 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 UPK3AO75631 287 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 UMODP07911 640 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 RCC1P18754 421 aaPredicted RBP9.53□□□□□ -0.88
FAM3A-221ENST00000612856 ALDH3B1P43353 468 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 OR8G1Q15617 311 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.53□□□□□ -0.88
FAM3A-221ENST00000612856 SLC25A30Q5SVS4 291 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 THEM4Q5T1C6 240 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 ETFRF1Q6IPR1 90 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF705AQ6ZN79 300 aaPredicted RBP9.53□□□□□ -0.88
FAM3A-221ENST00000612856 C17orf78Q8N4C9 275 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 EDARADDQ8WWZ3 215 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 WBP1Q96G27 269 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 OPA3Q9H6K4 179 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 MSL2Q9HCI7 577 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 MRPS28Q9Y2Q9 187 aaKnown RBP9.53□□□□□ -0.88
FAM3A-221ENST00000612856 DMRT1Q9Y5R6 373 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 SIRPB1O00241 398 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 GPRIN2O60269 458 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 ACTL6BO94805 426 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 MMP7P09237 267 aaPredicted RBP9.53□□□□□ -0.88
FAM3A-221ENST00000612856 CA6P23280 308 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 P2RY4P51582 365 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF136P52737 540 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 GLIPR1L1Q6UWM5 242 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 CD300LDQ6UXZ3 194 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 SLC16A9Q7RTY1 509 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 OR5T1Q8NG75 326 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 OR5M8Q8NGP6 311 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 OR10AC1Q8NH08 325 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 PGLYRP3Q96LB9 341 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 SLC25A21Q9BQT8 299 aaPredicted RBP9.53□□□□□ -0.88
FAM3A-221ENST00000612856 KCNIP1Q9NZI2 227 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 STEAP1Q9UHE8 339 aa9.53□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF727A8MUV8 499 aa9.52□□□□□ -0.88
FAM3A-221ENST00000612856 TMPRSS3P57727 454 aa9.52□□□□□ -0.88
FAM3A-221ENST00000612856 RAC3P60763 192 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms