RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-215	ENST00000612795	RAX2	Q96IS3	184 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	TTTY10	Q9BZA0	68 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	MYLK2	Q9H1R3	596 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	GAL3ST2	Q9H3Q3	398 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	REEP1	Q9H902	201 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795		F8VVB4	439 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795		F8VWA3	439 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	TOR1A	O14656	332 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	IGLV1-47	P01700	117 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	TTR	P02766	147 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	SNRNP70	P08621	437 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	FAM106CP	P0CH98	169 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	CDK2	P24941	298 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	RIDA	P52758	137 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	RBM39	Q14498	530 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	SLC35D3	Q5M8T2	416 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	OR10G2	Q8NGC3	310 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	OR52N4	Q8NGI2	321 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	NIPSNAP1	Q9BPW8	284 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	CADM1	Q9BY67	442 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	MTCH1	Q9NZJ7	389 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	GLS2	Q9UI32	602 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	LINC00527	Q9UJ94	153 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	IKZF2	Q9UKS7	526 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	SLC7A11	Q9UPY5	501 aa		13.58	□□□□□ -0.24
CSNK1E-215	ENST00000612795	TRGV10	A0A0A0MS01	117 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	SEC14L6	B5MCN3	397 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	LOC110117498-PIK3R3	F6TDL0	507 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	ZNF254	O75437	659 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	LY86	O95711	162 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	P2RX3	P56373	397 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	HLA-DRB5	Q30154	266 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	DEFB136	Q30KP8	78 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	BCL2L15	Q5TBC7	163 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	EGFL6	Q8IUX8	553 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	CPO	Q8IVL8	374 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	FOXRED2	Q8IWF2	684 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	ZNF679	Q8IYX0	411 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	OR8U1	Q8NH10	309 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	YIPF3	Q9GZM5	350 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	MOB1A	Q9H8S9	216 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	PLEKHA1	Q9HB21	404 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	ZNF286A	Q9HBT8	521 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	IL36RN	Q9UBH0	155 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	SMAD5-AS1	Q9Y6J3	95 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795		V9GYS6	101 aa		13.57	□□□□□ -0.24
CSNK1E-215	ENST00000612795	OOSP1	A8MZH6	123 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	BUB1B-PAK6	H3BSN5	160 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	MGST3	O14880	152 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	MRPL3	P09001	348 aa	Known RBP	13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	MAGEA2	P43356	314 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	HES1	Q14469	280 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	CYP2R1	Q6VVX0	501 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	HEPN1	Q6WQI6	88 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	SLC35E3	Q7Z769	313 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	ENTHD1	Q8IYW4	607 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	BBS1	Q8NFJ9	593 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	OR14K1	Q8NGZ2	314 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	SORL1	Q92673	2214 aa		13.56	□□□□□ -0.24
CSNK1E-215	ENST00000612795	PSPN	O60542	156 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	E2F6	O75461	281 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	PRDX6	P30041	224 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	PRRX1	P54821	245 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	ROM1	Q03395	351 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	ZNF91	Q05481	1191 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	APOF	Q13790	326 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	GINS1	Q14691	196 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	KPNB1	Q14974	876 aa	Known RBP	13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	OR2T5	Q6IEZ7	315 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	CD300LD	Q6UXZ3	194 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	SLC25A26	Q70HW3	274 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	MEPCE	Q7L2J0	689 aa	Known RBP	13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	PGAM4	Q8N0Y7	254 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	C5orf56	Q8N8D9	126 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	OR2T29	Q8NH02	315 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	OR56B4	Q8NH76	319 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	TOMM40L	Q969M1	308 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	RPE	Q96AT9	228 aa		13.55	□□□□□ -0.24
CSNK1E-215	ENST00000612795	DHRS7C	A6NNS2	312 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	PRR32	B1ATL7	298 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	TMEM11	P17152	192 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	DUSP1	P28562	367 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	CD34	P28906	385 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	ERP29	P30040	261 aa	Known RBP	13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	OR3A1	P47881	315 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	SNU13	P55769	128 aa	Known RBP	13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	ZFAND6	Q6FIF0	208 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	TEX38	Q6PEX7	206 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	LCNL1	Q6ZST4	164 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795		Q8IYB0	196 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	STPG2	Q8N412	459 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	ASB17	Q8WXJ9	295 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	PCDHB16	Q9NRJ7	776 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	TMEM14A	Q9Y6G1	99 aa		13.54	□□□□□ -0.24
CSNK1E-215	ENST00000612795	FUOM	A2VDF0	154 aa		13.53	□□□□□ -0.24
CSNK1E-215	ENST00000612795	SIRPB1	O00241	398 aa		13.53	□□□□□ -0.24
CSNK1E-215	ENST00000612795	HMGN1	P05114	100 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms