RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TUBD1Q9UJT1 453 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 KNG1P01042 644 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 HOXB5P09067 269 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 GFRA1P56159 465 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 SRYQ05066 204 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 ZNF169Q14929 603 aaPredicted RBP12.73□□□□□ -0.37
CDH1-213ENST00000612417 RSU1Q15404 277 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 DEFB109BQ30KR1 87 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 ZNF766Q5HY98 468 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 PABPC1L2AQ5JQF8 200 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 PDSS1Q5T2R2 415 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 ABLIM2Q6H8Q1 611 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 LHFPL2Q6ZUX7 228 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.73□□□□□ -0.37
CDH1-213ENST00000612417 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 SVBPQ8N300 66 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 TMEM251Q8N6I4 163 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 OR2AE1Q8NHA4 323 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 CRLF2Q9HC73 371 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 IGKV1-27A0A075B6S5 117 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 FAM74A7A6NL05 159 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 LINC01387J3KSC0 135 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 NTF4P34130 210 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 FAM74A3Q4VXF1 159 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 RIPPLY2Q5TAB7 128 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 ZNF774Q6NX45 483 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 SMIM8Q96KF7 97 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 CNTNAP3BQ96NU0 1288 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 HDHD3Q9BSH5 251 aaPredicted RBP12.73□□□□□ -0.37
CDH1-213ENST00000612417 CNTNAP3Q9BZ76 1288 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 RGCCQ9H4X1 137 aa12.73□□□□□ -0.37
CDH1-213ENST00000612417 CARHSP1Q9Y2V2 147 aaKnown RBP12.73□□□□□ -0.37
CDH1-213ENST00000612417 AKAP13Q12802 2813 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 LOC400499M0QZD8 3231 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 ZFHX4Q86UP3 3567 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 ZNF891A8MT65 544 aaPredicted RBP12.72□□□□□ -0.37
CDH1-213ENST00000612417 ZNF708P17019 499 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 ADCYAP1P18509 176 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 CHATP28329 748 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 RBP2P50120 134 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 CLDN15P56746 228 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 RSPO4Q2I0M5 234 aaPredicted RBP12.72□□□□□ -0.37
CDH1-213ENST00000612417 MST1LQ2TV78 715 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 FAM209BQ5JX69 171 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 EIF5AL1Q6IS14 154 aaKnown RBP12.72□□□□□ -0.37
CDH1-213ENST00000612417 DHRS11Q6UWP2 260 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 BOLLQ8N9W6 283 aaKnown RBP12.72□□□□□ -0.37
CDH1-213ENST00000612417 FDCSPQ8NFU4 85 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 OR4A4PQ8NGN8 299 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 ADGRG7Q96K78 797 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 TSNAXQ99598 290 aaKnown RBP12.72□□□□□ -0.37
CDH1-213ENST00000612417 IL36GQ9NZH8 169 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 AK3Q9UIJ7 227 aa12.72□□□□□ -0.37
CDH1-213ENST00000612417 PURGQ9UJV8 347 aaKnown RBP12.72□□□□□ -0.37
CDH1-213ENST00000612417 OR5H8P0DN80 308 aa12.71□□□□□ -0.37
CDH1-213ENST00000612417 HKR1P10072 659 aa12.71□□□□□ -0.37
CDH1-213ENST00000612417 ZNF32P17041 273 aa12.71□□□□□ -0.37
CDH1-213ENST00000612417 ARHGDIBP52566 201 aa12.71□□□□□ -0.37
CDH1-213ENST00000612417 IAH1Q2TAA2 248 aaPredicted RBP12.71□□□□□ -0.37
CDH1-213ENST00000612417 FNDC9Q8TBE3 224 aa12.71□□□□□ -0.37
CDH1-213ENST00000612417 MICU1Q9BPX6 476 aa12.71□□□□□ -0.37
CDH1-213ENST00000612417 NECAP2Q9NVZ3 263 aa12.71□□□□□ -0.37
CDH1-213ENST00000612417 GSKIPQ9P0R6 139 aa12.71□□□□□ -0.37
CDH1-213ENST00000612417 ZNF629Q9UEG4 869 aaPredicted RBP12.71□□□□□ -0.37
CDH1-213ENST00000612417 SPRY1O43609 319 aaPredicted RBP12.71□□□□□ -0.38
CDH1-213ENST00000612417 ANGPTL7O43827 346 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 DEDDO75618 318 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 LCATP04180 440 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 GAPDHP04406 335 aaKnown RBP12.71□□□□□ -0.38
CDH1-213ENST00000612417 SFTPBP07988 381 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 FCGR3AP08637 254 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 H2AFB1P0C5Y9 115 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 S100A10P60903 97 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 PJVKQ0ZLH3 352 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 TAF9Q16594 264 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 AAED1Q7RTV5 226 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 PUSL1Q8N0Z8 303 aaKnown RBP12.71□□□□□ -0.38
CDH1-213ENST00000612417 TMEM178AQ8NBL3 297 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 BORCS8Q96FH0 119 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 GALNT14Q96FL9 552 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 ZNF845Q96IR2 970 aaPredicted RBP12.71□□□□□ -0.38
CDH1-213ENST00000612417 FAAP24Q9BTP7 215 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 PRELID3BQ9Y3B1 194 aa12.71□□□□□ -0.38
CDH1-213ENST00000612417 PRRC2CQ9Y520 2896 aaKnown RBP12.71□□□□□ -0.38
CDH1-213ENST00000612417 CFAP47Q6ZTR5 3102 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 hCG_38984A0A1B0GV85 526 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 FAM230AA0A1W2PPH8 454 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 ZNF705EA8MWA4 302 aaPredicted RBP12.7□□□□□ -0.38
CDH1-213ENST00000612417 ST8SIA5O15466 376 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 SNAPINO95295 136 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 NRASP01111 189 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 B4GALT1P15291 398 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 TNFSF10P50591 281 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 PCBD1P61457 104 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 NHLH1Q02575 133 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 SLC10A1Q14973 349 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 TMEM268Q5VZI3 342 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 CPNE4Q96A23 557 aaPredicted RBP12.7□□□□□ -0.38
CDH1-213ENST00000612417 TECTBQ96PL2 329 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 ALKBH3Q96Q83 286 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms