RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 COMPP49747 757 aaPredicted RBP10.14□□□□□ -0.79
CBWD3-208ENST00000612050 ADARB1P78563 741 aaKnown RBP10.14□□□□□ -0.79
CBWD3-208ENST00000612050 CDK5R1Q15078 307 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 SATL1Q86VE3 508 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 SAXO1Q8IYX7 474 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 OR8H2Q8N162 312 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 PARP16Q8N5Y8 322 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 OR4M1Q8NGD0 313 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 OR51A4Q8NGJ6 313 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 OR52N1Q8NH53 320 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 THRSPQ92748 146 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 RFT1Q96AA3 541 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 PRDM13Q9H4Q3 707 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 SEBOXQ9HB31 216 aaPredicted RBP10.14□□□□□ -0.79
CBWD3-208ENST00000612050 PCDHB16Q9NRJ7 776 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 BABAM2Q9NXR7 383 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 SCN3BQ9NY72 215 aa10.14□□□□□ -0.79
CBWD3-208ENST00000612050 COL6A5A8TX70 2615 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 IGKV1-27A0A075B6S5 117 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 A0A1B0GUS0 222 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 MDFIC2A0A1B0GVS7 189 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 SPRY1O43609 319 aaPredicted RBP10.13□□□□□ -0.79
CBWD3-208ENST00000612050 MELTFP08582 738 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 BCL3P20749 454 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 SOX2P48431 317 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 ETV1P50549 477 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 MEF2CQ06413 473 aaPredicted RBP10.13□□□□□ -0.79
CBWD3-208ENST00000612050 ST3GAL4Q11206 333 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 EDDM3AQ14507 147 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 KISS1Q15726 138 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 GRK1Q15835 563 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 MIDNQ504T8 468 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 GDPGP1Q6ZNW5 385 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 TRAPPC6BQ86SZ2 158 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 OR5D18Q8NGL1 313 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 OR10AC1Q8NH08 325 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 DYRK2Q92630 601 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 SMIM19Q96E16 107 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 FAM192AQ9GZU8 254 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 UNKLQ9H9P5 680 aaKnown RBP10.13□□□□□ -0.79
CBWD3-208ENST00000612050 C19orf12Q9NSK7 152 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 RBFOX1Q9NWB1 397 aaKnown RBP10.13□□□□□ -0.79
CBWD3-208ENST00000612050 ERGIC3Q9Y282 383 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 GSTK1Q9Y2Q3 226 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 ZNF281Q9Y2X9 895 aa10.13□□□□□ -0.79
CBWD3-208ENST00000612050 IGKV1-9A0A0C4DH69 117 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 A0A0U1RQK1 487 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 ERICH4A6NGS2 130 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 RNASEK-C17orf49H0YIS7 233 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 MGST3O14880 152 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 FCN3O75636 299 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 ZNF44P15621 663 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 SNU13P55769 128 aaKnown RBP10.12□□□□□ -0.79
CBWD3-208ENST00000612050 ZNF146Q15072 292 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 TUSC1Q2TAM9 212 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 AWAT1Q58HT5 328 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 YIF1BQ5BJH7 314 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 OR2G6Q5TZ20 316 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 TMEM200BQ69YZ2 307 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 LDLRAD3Q86YD5 345 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 CHST4Q8NCG5 386 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 BPIFB6Q8NFQ5 453 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 OR13D1Q8NGV5 346 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 OR4F5Q8NH21 305 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 OR5R1Q8NH85 324 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 TMEM106AQ96A25 262 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 ZNF714Q96N38 554 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 HMG20AQ9NP66 347 aa10.12□□□□□ -0.79
CBWD3-208ENST00000612050 PAK1IP1Q9NWT1 392 aaPredicted RBP10.12□□□□□ -0.79
CBWD3-208ENST00000612050 SVEP1Q4LDE5 3571 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 A0A1W2PRD5 423 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 A0A1W2PRF3 423 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 A0A1W2PRM7 423 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 POM121CA8CG34 1229 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 E9PI62 339 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 H0YJX3 145 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 H3BUI4 141 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 KDM4BO94953 1096 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 RBP4P02753 201 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 CSTBP04080 98 aaKnown RBP10.11□□□□□ -0.79
CBWD3-208ENST00000612050 SAA4P35542 130 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 MTNR1BP49286 362 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 GTF2A1P52655 376 aaPredicted RBP10.11□□□□□ -0.79
CBWD3-208ENST00000612050 SCN1BQ07699 218 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 RSU1Q15404 277 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 AHSA2Q719I0 299 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 Q8N7P7 452 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 DTX3Q8N9I9 347 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 GGHQ92820 318 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 MYDGFQ969H8 173 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 SPACA5Q96QH8 159 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 GAL3ST2Q9H3Q3 398 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 BEX1Q9HBH7 125 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 TMEM138Q9NPI0 162 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 PLCXD1Q9NUJ7 323 aa10.11□□□□□ -0.79
CBWD3-208ENST00000612050 TRGV10A0A0A0MS01 117 aa10.1□□□□□ -0.79
CBWD3-208ENST00000612050 FAM181BA6NEQ2 426 aa10.1□□□□□ -0.79
CBWD3-208ENST00000612050 SIRPB1O00241 398 aa10.1□□□□□ -0.79
CBWD3-208ENST00000612050 OGG1O15527 345 aa10.1□□□□□ -0.79
CBWD3-208ENST00000612050 ZNF728P0DKX0 622 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms