RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 ZFP41Q8N8Y5 198 aa15.97■□□□□ 0.15
UPF1-212ENST00000601689 CNBD2Q96M20 576 aa15.97■□□□□ 0.15
UPF1-212ENST00000601689 CDCA4Q9BXL8 241 aa15.97■□□□□ 0.15
UPF1-212ENST00000601689 CCDC90BQ9GZT6 254 aa15.97■□□□□ 0.15
UPF1-212ENST00000601689 FAM192AQ9GZU8 254 aa15.97■□□□□ 0.15
UPF1-212ENST00000601689 METTL8Q9H825 291 aaKnown RBP15.97■□□□□ 0.15
UPF1-212ENST00000601689 EXOSC4Q9NPD3 245 aaKnown RBP15.97■□□□□ 0.15
UPF1-212ENST00000601689 PAK1IP1Q9NWT1 392 aaPredicted RBP15.97■□□□□ 0.15
UPF1-212ENST00000601689 TAS2R4Q9NYW5 299 aa15.97■□□□□ 0.15
UPF1-212ENST00000601689 MXRA5Q9NR99 2828 aa15.97■□□□□ 0.15
UPF1-212ENST00000601689 K7N7A8 449 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 RGS10O43665 173 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 ANGPTL7O43827 346 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 KDM4BO94953 1096 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 MMP9P14780 707 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 GABRR1P24046 479 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 BDKRB2P30411 391 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 CEBPDP49716 269 aaPredicted RBP15.96■□□□□ 0.15
UPF1-212ENST00000601689 EDDM3BP56851 147 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 ZNF146Q15072 292 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 SPHARQ15513 63 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 MED22Q15528 200 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 RBM48Q5RL73 367 aaKnown RBP15.96■□□□□ 0.15
UPF1-212ENST00000601689 FGFRL1Q8N441 504 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 MS4A15Q8N5U1 240 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 PXT1Q8NFP0 134 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 SPATA3Q8NHX4 192 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 TBX15Q96SF7 602 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 MDFIQ99750 246 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 HMG20AQ9NP66 347 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 RBFOX1Q9NWB1 397 aaKnown RBP15.96■□□□□ 0.15
UPF1-212ENST00000601689 GSTK1Q9Y2Q3 226 aa15.96■□□□□ 0.15
UPF1-212ENST00000601689 SIRT4Q9Y6E7 314 aaPredicted RBP15.96■□□□□ 0.15
UPF1-212ENST00000601689 FCN3O75636 299 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 LALBAP00709 142 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 ZNF93P35789 620 aaPredicted RBP15.95■□□□□ 0.14
UPF1-212ENST00000601689 NPBWR2P48146 333 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 MTNR1BP49286 362 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 ACSM1Q08AH1 577 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 BAMBIQ13145 260 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 RSU1Q15404 277 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 DDI2Q5TDH0 399 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 METAP1DQ6UB28 335 aaPredicted RBP15.95■□□□□ 0.14
UPF1-212ENST00000601689 OR8H2Q8N162 312 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 SIGLECL1Q8N7X8 197 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 ZNF485Q8NCK3 441 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 TNFAIP8L1Q8WVP5 186 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 FAM96BQ9Y3D0 163 aa15.95■□□□□ 0.14
UPF1-212ENST00000601689 IGHV1-69DA0A0B4J2H0 117 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 TRBV5-5A0A0J9YX44 114 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 CENPVL3A0A0U1RRI6 287 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 VENTXO95231 258 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 IGHV1-69P01742 117 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 CSTBP04080 98 aaKnown RBP15.94■□□□□ 0.14
UPF1-212ENST00000601689 ZNF44P15621 663 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 SNU13P55769 128 aaKnown RBP15.94■□□□□ 0.14
UPF1-212ENST00000601689 SLC35A2P78381 396 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 BRD3OSQ6XYD6 125 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 CHST4Q8NCG5 386 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 RGP1Q92546 391 aaPredicted RBP15.94■□□□□ 0.14
UPF1-212ENST00000601689 SLC25A28Q96A46 364 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 PGLYRP3Q96LB9 341 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 C19orf24Q9BVV8 132 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 NOX4Q9NPH5 578 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 SIRT7Q9NRC8 400 aa15.94■□□□□ 0.14
UPF1-212ENST00000601689 SF3B6Q9Y3B4 125 aaKnown RBP15.94■□□□□ 0.14
UPF1-212ENST00000601689 hADV38S2A0JD32 116 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 F8VVB4 439 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 F8VWA3 439 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 ZNF780AO75290 641 aaPredicted RBP15.93■□□□□ 0.14
UPF1-212ENST00000601689 TGFBR2P37173 567 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 ACTG1P63261 375 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 SCN1BQ07699 218 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 GPR50Q13585 617 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 GRK1Q15835 563 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 KRTAP24-1Q3LI83 254 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 ZNF529Q6P280 563 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 BCL6BQ8N143 479 aaPredicted RBP15.93■□□□□ 0.14
UPF1-212ENST00000601689 OR4M1Q8NGD0 313 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 OR52N4Q8NGI2 321 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 FAM216AQ8WUB2 273 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 UFD1Q92890 307 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 METTL9Q9H1A3 318 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 HEXA-AS1Q9H8Q6 139 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 ING4Q9UNL4 249 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 FOXJ3Q9UPW0 622 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 ATRQ13535 2644 aa15.93■□□□□ 0.14
UPF1-212ENST00000601689 MEGF11A6BM72 1044 aa15.92■□□□□ 0.14
UPF1-212ENST00000601689 MGST3O14880 152 aa15.92■□□□□ 0.14
UPF1-212ENST00000601689 DEGS1O15121 323 aa15.92■□□□□ 0.14
UPF1-212ENST00000601689 PRTN3P24158 256 aa15.92■□□□□ 0.14
UPF1-212ENST00000601689 ZP1P60852 638 aa15.92■□□□□ 0.14
UPF1-212ENST00000601689 MEF2CQ06413 473 aaPredicted RBP15.92■□□□□ 0.14
UPF1-212ENST00000601689 DOC2BQ14184 412 aa15.92■□□□□ 0.14
UPF1-212ENST00000601689 GPR176Q14439 515 aa15.92■□□□□ 0.14
UPF1-212ENST00000601689 EDDM3AQ14507 147 aa15.92■□□□□ 0.14
UPF1-212ENST00000601689 PRSS48Q7RTY5 328 aa15.92■□□□□ 0.14
UPF1-212ENST00000601689 OR51A2Q8NGJ7 313 aa15.92■□□□□ 0.14
UPF1-212ENST00000601689 OR14A2Q96R54 314 aa15.92■□□□□ 0.14
UPF1-212ENST00000601689 ZNF184Q99676 751 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms