RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.06■□□□□ 0.64
IRF3-228ENST00000601291 IL36RNQ9UBH0 155 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 SPTBN1Q01082 2364 aaKnown RBP19.05■□□□□ 0.64
IRF3-228ENST00000601291 A0A1W2PQ09 198 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 ISPDA4D126 451 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 MELTFP08582 738 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 CD3GP09693 182 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 IRF2P14316 349 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 CHATP28329 748 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 GNG2P59768 71 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 SIGIRRQ6IA17 410 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 TRIM63Q969Q1 353 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 UBTD1Q9HAC8 227 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 SPACA1Q9HBV2 294 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 RNF7Q9UBF6 113 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 GLS2Q9UI32 602 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 NPTNQ9Y639 398 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 DOPEY1Q5JWR5 2465 aa19.05■□□□□ 0.64
IRF3-228ENST00000601291 A0A1W2PPR1 153 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 MEIOCA2RUB1 952 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 LRRC30A6NM36 301 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 SRRM5B3KS81 715 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 LPLP06858 475 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 FUT3P21217 361 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 DEFA1P59665 94 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 DEFA3P59666 94 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 ATAD3CQ5T2N8 411 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 ACP7Q6ZNF0 438 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 C6orf201Q7Z4U5 140 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 DTX2Q86UW9 622 aa19.04■□□□□ 0.64
IRF3-228ENST00000601291 VRK1Q99986 396 aaPredicted RBP19.04■□□□□ 0.64
IRF3-228ENST00000601291 UBR5O95071 2799 aaPredicted RBP19.04■□□□□ 0.64
IRF3-228ENST00000601291 WNT9BO14905 357 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 CLDN1O95832 211 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 DANCRP0C864 163 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 COX6B1P14854 86 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 PMELP40967 661 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 ARFRP1Q13795 201 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 ZNF146Q15072 292 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 PDCD1Q15116 288 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 ZNF57Q68EA5 555 aaPredicted RBP19.03■□□□□ 0.64
IRF3-228ENST00000601291 DNM1P46Q6ZS02 220 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 FAM90A1Q86YD7 464 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 GCSAMQ8N6F7 178 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 GPX8Q8TED1 209 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 WDR13Q9H1Z4 485 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 KCNK7Q9Y2U2 307 aa19.03■□□□□ 0.64
IRF3-228ENST00000601291 RBBP9O75884 186 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 KNG1P01042 644 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 DUSP1P28562 367 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 GDNFP39905 211 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 ACTBP60709 375 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 ACTG1P63261 375 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 GUCA2AQ02747 115 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 SSBP1Q04837 148 aaKnown RBP19.02■□□□□ 0.64
IRF3-228ENST00000601291 C11orf71Q6IPW1 123 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 RTN4RL2Q86UN3 420 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 ST8SIA4Q92187 359 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 SEH1LQ96EE3 360 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 IFT22Q9H7X7 185 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 DNAJB11Q9UBS4 358 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 ELF5Q9UKW6 265 aaPredicted RBP19.02■□□□□ 0.64
IRF3-228ENST00000601291 PLEKHA6Q9Y2H5 1048 aa19.02■□□□□ 0.64
IRF3-228ENST00000601291 A1L4Q6 167 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 FAM221AA4D161 298 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 H7C417 338 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 SH2D1BO14796 132 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 DEGS1O15121 323 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 LANCL1O43813 399 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 CA11O75493 328 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 LHBP01229 141 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 SOD3P08294 240 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 ZNF44P15621 663 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 MRPS15P82914 257 aaKnown RBP19.02■□□□□ 0.63
IRF3-228ENST00000601291 TLE4Q04727 773 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 TRAPPC6BQ86SZ2 158 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 TOMM5Q8N4H5 51 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 BOLLQ8N9W6 283 aaKnown RBP19.02■□□□□ 0.63
IRF3-228ENST00000601291 SETD6Q8TBK2 473 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 NUDCD2Q8WVJ2 157 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 TRAF4Q9BUZ4 470 aaPredicted RBP19.02■□□□□ 0.63
IRF3-228ENST00000601291 RAB1BQ9H0U4 201 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 ZNF581Q9P0T4 197 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 RCC2Q9P258 522 aaKnown RBP19.02■□□□□ 0.63
IRF3-228ENST00000601291 MTFP1Q9UDX5 166 aa19.02■□□□□ 0.63
IRF3-228ENST00000601291 RBMX2Q9Y388 322 aaKnown RBP19.02■□□□□ 0.63
IRF3-228ENST00000601291 C3orf80F5H4A9 247 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 IFNL4K9M1U5 179 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 ORC5O43913 435 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 GSTT2BP0CG30 244 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 EGR1P18146 543 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 AP3S2P59780 193 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 OLFML2AQ68BL7 652 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 C1orf87Q8N0U7 546 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 FAAP24Q9BTP7 215 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 TAS2R8Q9NYW2 309 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 KLK11Q9UBX7 282 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 OR14J1Q9UGF5 321 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 CHD6Q8TD26 2715 aa19.01■□□□□ 0.63
IRF3-228ENST00000601291 ECDO95905 644 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms