RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 SESN1Q9Y6P5 492 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 MINOS1-NBL1R4GNA1 71 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 TRBV2A0A0J9YWF9 115 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 DYNC1I1O14576 645 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 IGHA1P01876 353 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 GABRR1P24046 479 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 KIR3DL2P43630 455 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 NPBWR2P48146 333 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 ZNF85Q03923 595 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 ZNF91Q05481 1191 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 ZNF146Q15072 292 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 GRK1Q15835 563 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 C1orf146Q5VVC0 180 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 FAM220AQ7Z4H9 259 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 NDUFA11Q86Y39 141 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 FAM58AQ8N1B3 248 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 ZNF676Q8N7Q3 588 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 TPRX1Q8N7U7 411 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 WIPF2Q8TF74 440 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-204ENST00000601038 RNF166Q96A37 237 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-204ENST00000601038 CENPNQ96H22 339 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-204ENST00000601038 CHST6Q9GZX3 395 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 RIBC2Q9H4K1 309 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 RBFOX1Q9NWB1 397 aaKnown RBP13.68□□□□□ -0.22
SCAF1-204ENST00000601038 IL36RNQ9UBH0 155 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 HILPDAQ9Y5L2 63 aa13.68□□□□□ -0.22
SCAF1-204ENST00000601038 IGHV2-26A0A0B4J1V2 119 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 IGKV1-9A0A0C4DH69 117 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 MGST3O14880 152 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 XPNPEP2O43895 674 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 PSPNO60542 156 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 CYB5AP00167 134 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 CD28P10747 220 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 BCL3P20749 454 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 PRKACBP22694 351 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 ERP29P30040 261 aaKnown RBP13.67□□□□□ -0.22
SCAF1-204ENST00000601038 MTCP1P56278 107 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 NSUN5P1Q3KNT7 163 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 TP53I3Q53FA7 332 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 SPIN3Q5JUX0 258 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 TMEM244Q5VVB8 128 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 ZBTB49Q6ZSB9 765 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 UTS2BQ765I0 119 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 KCTD20Q7Z5Y7 419 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 LYG1Q8N1E2 194 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 OR4S1Q8NGB4 309 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 OR2G2Q8NGZ5 317 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 ADAT3Q96EY9 351 aaPredicted RBP13.67□□□□□ -0.22
SCAF1-204ENST00000601038 OSBPL10Q9BXB5 764 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 CLEC7AQ9BXN2 247 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 WNT10AQ9GZT5 417 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 TMEM133Q9H2Q1 129 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 FAM53CQ9NYF3 392 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 GLS2Q9UI32 602 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 OAZ3Q9UMX2 235 aa13.67□□□□□ -0.22
SCAF1-204ENST00000601038 FAM90A22PA8MWA6 464 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 H3BUI4 141 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 F2RL2O00254 374 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 PEX14O75381 377 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 ISG15P05161 165 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 ATF1P18846 271 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 DUSP1P28562 367 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 POU3F4P49335 361 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 CDC42P60953 191 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 BLCAPP62952 87 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 SLC34A1Q06495 639 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 FBLN7Q53RD9 439 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 FDX2Q6P4F2 183 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 LHFPL2Q6ZUX7 228 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 NDNFQ8TB73 568 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 TRUB1Q8WWH5 349 aaKnown RBP13.66□□□□□ -0.22
SCAF1-204ENST00000601038 FRRS1LQ9P0K9 344 aa13.66□□□□□ -0.22
SCAF1-204ENST00000601038 UBE2J1Q9Y385 318 aaPredicted RBP13.66□□□□□ -0.22
SCAF1-204ENST00000601038 ENTPD6O75354 484 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 ATP5HO75947 161 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 JUNBP17275 347 aaPredicted RBP13.65□□□□□ -0.22
SCAF1-204ENST00000601038 PRKACAP17612 351 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 AZGP1P25311 298 aaKnown RBP13.65□□□□□ -0.22
SCAF1-204ENST00000601038 HTR1DP28221 377 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 OR3A1P47881 315 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 PDZK1IP1Q13113 114 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 Q6ZS46 218 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 REC114Q7Z4M0 266 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 OR4F17Q8NGA8 305 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 SPSB1Q96BD6 273 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 FGGYQ96C11 551 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 OR4F4Q96R69 305 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 MBOAT4Q96T53 435 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 CITED2Q99967 270 aaPredicted RBP13.65□□□□□ -0.22
SCAF1-204ENST00000601038 MMP28Q9H239 520 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 HMG20AQ9NP66 347 aa13.65□□□□□ -0.22
SCAF1-204ENST00000601038 NOTCH3Q9UM47 2321 aa13.64□□□□□ -0.23
SCAF1-204ENST00000601038 PRKDCP78527 4128 aaKnown RBP13.64□□□□□ -0.23
SCAF1-204ENST00000601038 ADARB2-AS1A8MUL3 147 aa13.64□□□□□ -0.23
SCAF1-204ENST00000601038 SH2D1BO14796 132 aa13.64□□□□□ -0.23
SCAF1-204ENST00000601038 MMP23AO75900 390 aa13.64□□□□□ -0.23
SCAF1-204ENST00000601038 ALDOBP05062 364 aa13.64□□□□□ -0.23
SCAF1-204ENST00000601038 CALCBP10092 127 aa13.64□□□□□ -0.23
SCAF1-204ENST00000601038 ZNF20P17024 532 aa13.64□□□□□ -0.23
SCAF1-204ENST00000601038 P2RX3P56373 397 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms