RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 SAMD5Q5TGI4 173 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 ZNF626Q68DY1 528 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 KDM4DQ6B0I6 523 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 Q6ZS46 218 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 FAM220AQ7Z4H9 259 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 PRSS35Q8N3Z0 413 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 OR4S1Q8NGB4 309 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 OR52N4Q8NGI2 321 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 SGCDQ92629 289 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 RFT1Q96AA3 541 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 CIB1Q99828 191 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 ING3Q9NXR8 418 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 PITPNC1Q9UKF7 332 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 AP4S1Q9Y587 144 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 KIAA2026Q5HYC2 2103 aa14.17□□□□□ -0.14
SHKBP1-223ENST00000600552 FAM172BPA6NC97 362 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 SAC3D1A6NKF1 404 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 OCM2P0CE71 109 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 OCMP0CE72 109 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 CD24P25063 80 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 HTR1FP30939 366 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 VDAC2P45880 294 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 MTCP1P56278 107 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 SCN1BQ07699 218 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 Q6ZSR3 168 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 TCF23Q7RTU1 214 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 FAM58AQ8N1B3 248 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 OR11H6Q8NGC7 330 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 CHST5Q9GZS9 411 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 SESN1Q9Y6P5 492 aa14.16□□□□□ -0.14
SHKBP1-223ENST00000600552 ZNF20P17024 532 aa14.15□□□□□ -0.14
SHKBP1-223ENST00000600552 KIR3DL2P43630 455 aa14.15□□□□□ -0.14
SHKBP1-223ENST00000600552 RBP2P50120 134 aa14.15□□□□□ -0.14
SHKBP1-223ENST00000600552 MEF2CQ06413 473 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-223ENST00000600552 C1orf146Q5VVC0 180 aa14.15□□□□□ -0.14
SHKBP1-223ENST00000600552 EME1Q96AY2 570 aa14.15□□□□□ -0.14
SHKBP1-223ENST00000600552 FGGYQ96C11 551 aa14.15□□□□□ -0.14
SHKBP1-223ENST00000600552 ENOPH1Q9UHY7 261 aa14.15□□□□□ -0.14
SHKBP1-223ENST00000600552 GSTK1Q9Y2Q3 226 aa14.15□□□□□ -0.14
SHKBP1-223ENST00000600552 IGHV2-26A0A0B4J1V2 119 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 PSPNO60542 156 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 SULT1C4O75897 302 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 MMP23AO75900 390 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 RBP4P02753 201 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 ZNF85Q03923 595 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 PRAMEF5Q5TYX0 476 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 BAIAP2L2Q6UXY1 529 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 ENTHD1Q8IYW4 607 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 OR4F17Q8NGA8 305 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 MRAPQ8TCY5 172 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 CAPSLQ8WWF8 208 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 STMN2Q93045 179 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 ADAT3Q96EY9 351 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 OR4F4Q96R69 305 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 CLEC7AQ9BXN2 247 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 GABARAPL1Q9H0R8 117 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 TMEM133Q9H2Q1 129 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 NEK6Q9HC98 313 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 GLS2Q9UI32 602 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 LINC00312Q9Y6C7 94 aa14.14□□□□□ -0.15
SHKBP1-223ENST00000600552 H3BUI4 141 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 PIN1P1O15428 100 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 XPNPEP2O43895 674 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 UBCP0CG48 685 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 ATF1P18846 271 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 HTR1DP28221 377 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 ZNF91Q05481 1191 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 FBLN7Q53RD9 439 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 Q6ZPA2 131 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 NDUFA11Q86Y39 141 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 Q8IYB0 196 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 OR5D18Q8NGL1 313 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 SPACA5Q96QH8 159 aa14.13□□□□□ -0.15
SHKBP1-223ENST00000600552 IGKV1-9A0A0C4DH69 117 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 DAPL1A0PJW8 107 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 MGST3O14880 152 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 ENTPD6O75354 484 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 AZGP1P25311 298 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 MINOS1Q5TGZ0 78 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 CENPVQ7Z7K6 275 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 Q8N2B8 174 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 ABHD12Q8N2K0 398 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 CCDC54Q8NEL0 328 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 OR5AU1Q8NGC0 362 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 OR8J1Q8NGP2 316 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 PP6455Q8WZ26 134 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 RFKQ969G6 155 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 EXOSC4Q9NPD3 245 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 IMPAD1Q9NX62 359 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 OAZ3Q9UMX2 235 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 MINOS1-NBL1R4GNA1 71 aa14.12□□□□□ -0.15
SHKBP1-223ENST00000600552 TRBV2A0A0J9YWF9 115 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 SH2D7A6NKC9 451 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 SH2D1BO14796 132 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 ALDOBP05062 364 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 FCGR1AP12314 374 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 CD33P20138 364 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 PRKACBP22694 351 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 CDK2P24941 298 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 OR3A1P47881 315 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms